Gene CJJ81176_pVir0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCJJ81176_pVir0001 
Symbol 
ID4682029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. jejuni 81-176 
KingdomBacteria 
Replicon accessionNC_008770 
Strand+ 
Start bp1 
End bp678 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content30% 
IMG OID639832904 
ProductVirB8 
Protein accessionYP_980060 
Protein GI121582658 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3736] Type IV secretory pathway, component VirB8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTTA TTGACGATAA AAAAGATCCA AATTTTATAT TTCAACTTGA GAGAAATATA 
AAAGCGTATA TGCTATACAT TATTATAGCT TTAACTACGA TTGTAGTTTC TCTTGCTATT 
GCCATTACTT TTCTTGCCCC TTTTAAAGAA GTAAAGCCTT ATTTAGTATT TTTTTCAGAC 
GGCGAAACTA ATTTTGTAAA GGTAGAACAA GCAGGAATGG ATATGAGAGC CGATGAGAAT 
TTATTAAAAT CAATTCTCGC AGGCTATGTT AAAAAACGCG AAACGATAAA TCGTGTCGAT 
GATAGTGAGA GATACGAAGA GATCAGACTT CAATCTCAAA AAAATGTGTG GGAAACATTC 
TCAAACTTAG TAAAAGCTCC AAATTCTATT TATACAACGC AAGGAGTTTT TAGAAGCATT 
GAAATTATCA ATGTTTCAAT TTTTAATAAA AATGTAGCTA CGATCGATTT TATAGCAAAA 
ATAACTAATA GAGATGGTAG TGAGAACCAT TTAAAAAAAT ATCGTGCCAC ATTATTTTTT 
GATTTTATAC CAATGGAGCT TACTTATAAT TCAGTTCCAA AAAATCCTAC AGGCTTTATT 
GTCAAACAAT ATTCAATTAC AGACATTATT GACAATGATA CTTTTAACAA TACACAACAA 
ACGAAAGGAG CGAAGTAA
 
Protein sequence
MAFIDDKKDP NFIFQLERNI KAYMLYIIIA LTTIVVSLAI AITFLAPFKE VKPYLVFFSD 
GETNFVKVEQ AGMDMRADEN LLKSILAGYV KKRETINRVD DSERYEEIRL QSQKNVWETF 
SNLVKAPNSI YTTQGVFRSI EIINVSIFNK NVATIDFIAK ITNRDGSENH LKKYRATLFF 
DFIPMELTYN SVPKNPTGFI VKQYSITDII DNDTFNNTQQ TKGAK