| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4319 |
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| Symbol | |
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| ID | 4670440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008766 |
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| Strand | + |
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| Start bp | 61129 |
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| End bp | 63192 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639826983 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_974145 |
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| Protein GI | 121582616 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.535821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.574882 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTGT TCATCGCGGA AAAACCATCT GTCGCCAAGG CCATCGCCGG CGAGCTGGGC
GTCACCGGCA AGGGCGACGG CTACATCGAA TGCGGCGGCG ACAAAGTGAC CTGGTGCTTC
GGGCACATGC TGGAGCAGGC CGACCCGGAC GAGTACACGC CCGACGACGT GCCGACCGGG
AAATCGGGCA AGAAGCTATG GCGCGTCGAT GAGCTGCCCA TCATCCCGCA GACCTGGATT
CTTCACCCGA AGGACGATGC CAAGAAGCAG CTCGCCGTGA TCGGCAAGCT GCTGAAAGAG
GCCAAGGAGA TCGTCAACGC CGGCGACCCC GACCGTGAAG GCCAGTTGCT GGTCGATGAG
GTGCTGGAGC ACTTCAAGAG CAGCAAGCCG ACGCGCCGCT TTTGGGTGTC CGCCCAGGAT
TCGGTTTCCG TCAAGCGCGG CCTGGCCGCC TTGAAGGACA ACACCACGTA CAAGGGCTGG
GCCGACGCCG CACGCGGCCG GCAGCGGGCC GACTGGCTGA TCGGCATGAA CCTAAGCCGC
GCCTACACCT TGCGGGCGCA GCGCGGCGGT TCCAGGGCCT TGCTGACCGT GGGCCGGGTG
CAGACCCCGA CGCTGGCCCT GGTCGTGAAT CGTGACCGTG AAATCGAGGC TTTCAAGCCG
GTGCCGTATC ACACGATCCG CGCAGCGATT CAGCACGAAG GCGGCACGTT TATGGCCGCC
TGGAAGGCGA AGGAAGATCA AGCCGGCCTG GACAGCGAAG GCCGCCTTGT CGATACCGCC
GTCGCCGATG CCCTGGTGGC CGCCGTCAAG GGCCAACCGG GCACCATCGC CACCTACAAG
CAGGAAGCCA AGAAGAAGAA CCAGCCGCTG GCCTTCGCGC TGTCGGACAT TACGGCGCTG
GCGTCCGCGC GGTACGGCTA CAGCGCCGAG GACGTGCTGA ACACCTGCCA GGCGCTCTAC
GAGACGCACA AGCTGACCAG CTACCCGCGC ACCGACTGCG CCTACCTGCC GGAGTCGCAG
CACGCCGACG CGCCGCGCGT CCTGGAGGCC GTCAAGCACG TGAACCCCGA GCTGGCCGGC
CTGGTCGATG GTGCCGACCC GCGCATCAAG TCCAAGACGT GGGACGACTC GAAGATCACG
GCGCACCACG GCATCGTGCC GACCATGCAG AAGGGCAGCA AGGCCGGCTT GAGCGAACGC
GAGCGCAACA TCTACGAACT GATCGTCCGC GCCTACCTGG CGCAGTTCTA TCCGCTGCAC
GAGTACATGC AAACCACGGT CGGCGTGGAG ATCGCCGGCG AAAACTTCGC CGCGTCCGGC
AAGGTGGTCA CGCGCAACGG CTGGCGTGAC GTGTTCGACC AGGCCGACGA AGAGGACGCC
AAGGAAGGCG ACGACGAAAA CGGCGCGCAG ACCCTGCCGG TGATGAAGCA AGGCGACGGT
GTGACCTGCA CCGAGGCCAC CCGGCGCGAT GCGAAAACCA AGCCGCCGGC GCGCTTCACC
GAAGGCACGC TGATTCGCGC GATGGAGAAC ATCCACAAGT TCGTGAGCGA CCCGGAGCAC
AAGAAGATGC TGCGCGAAGG CGACGGCATC GGCACGTCCG CCACGCGCGC ATCCATCATT
TCCGAGCTGA AACGCCGCGC GTTCCTGGAA ACCAAGGGCA AGCAGATCGT CAGCACGACG
CTGGGCCGCA GCGTCATCGA CGCGCTGCCC GAGGTGGTGC GAAGCCCGGT GCTGACCGCC
CTTTACGAAC GCATGTTGAA GGGCGTCGAG CTGGGCACGG CGGCCCTGGA CGCCTTCATC
ACGAAGCAAG AGCAGTTCAT CCGCGACCAG GTGACGAAGG CCAACAGCGG AGCCGTGAGC
ATCGCCGGCG GCAAGGAAGC CGCGCCGGTG TCGTCCCTGC ACAAGTGCAT GGCCTGCGGC
ACCGGCTTGT CGCGGCGGCC CAGCAAGAAG AAGGGGCAAT TCTGGTGGGG CTGCGCCAAC
TTCCCCACGT GCAAGCAGAC CTATCCCGAC CTGAAAGGTC GGCCCGACTA CAGCAAGGGC
CGCAACGGCC CCGCTGCCGA GTAA
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| Protein sequence | MRLFIAEKPS VAKAIAGELG VTGKGDGYIE CGGDKVTWCF GHMLEQADPD EYTPDDVPTG
KSGKKLWRVD ELPIIPQTWI LHPKDDAKKQ LAVIGKLLKE AKEIVNAGDP DREGQLLVDE
VLEHFKSSKP TRRFWVSAQD SVSVKRGLAA LKDNTTYKGW ADAARGRQRA DWLIGMNLSR
AYTLRAQRGG SRALLTVGRV QTPTLALVVN RDREIEAFKP VPYHTIRAAI QHEGGTFMAA
WKAKEDQAGL DSEGRLVDTA VADALVAAVK GQPGTIATYK QEAKKKNQPL AFALSDITAL
ASARYGYSAE DVLNTCQALY ETHKLTSYPR TDCAYLPESQ HADAPRVLEA VKHVNPELAG
LVDGADPRIK SKTWDDSKIT AHHGIVPTMQ KGSKAGLSER ERNIYELIVR AYLAQFYPLH
EYMQTTVGVE IAGENFAASG KVVTRNGWRD VFDQADEEDA KEGDDENGAQ TLPVMKQGDG
VTCTEATRRD AKTKPPARFT EGTLIRAMEN IHKFVSDPEH KKMLREGDGI GTSATRASII
SELKRRAFLE TKGKQIVSTT LGRSVIDALP EVVRSPVLTA LYERMLKGVE LGTAALDAFI
TKQEQFIRDQ VTKANSGAVS IAGGKEAAPV SSLHKCMACG TGLSRRPSKK KGQFWWGCAN
FPTCKQTYPD LKGRPDYSKG RNGPAAE
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