| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4274 |
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| Symbol | |
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| ID | 4670496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008766 |
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| Strand | - |
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| Start bp | 22859 |
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| End bp | 23824 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639826946 |
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| Product | conjugal transfer ATPase TrbB |
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| Protein accession | YP_974108 |
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| Protein GI | 121582579 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1.39641e-17 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.780952 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGACC AAGACACCGA ACACGACAGC ATCAAAACGC GAGCGCGAAA GAAGCTCGAA
CGGGACATGG GGCCGACGCT TCTTGAGGCT CTGCACGATC CCAAGACGCA AGAAATTCTG
CTCAACGCGG ACGGCAAGCT CTGGCTTGAA AGCCAGGGCA AGCGGCTGCG TTGCATCGGC
ACCCTTCGCC GCGCACAAGC GCAGGCCATC ATCGAAACAG TGGCCGGCTA CCACGGCAAG
GAAGTCAAGC GGGACAGCCC ACTACTCGAA GGCGAGTTTC CCATTGATGG CTCGCGCTTC
GCGGGCCAGC TCGGCCCGGT CGTCACCGGC CCGACCTTTG CGATCCGCAA GAAGGCCATC
GCCGTTTTCA CGCTGGCTCA ATACGTCGAG CGCGGGATCA TGACCGAGGC CCAAAAGCAG
GCCATCGAGC GCGCTGCTGC GGCTCACAAA AACATCCTCG TCATTGGTGG CACCAGTTCC
GGCAAGACCA CCCTCGTGAA CGCCATCATC CAAGCGATGG TTGATAACGA TCCCTTGGAG
CGTTTCATCA TCATCGAGGA CACCGGCGAG ATTCAATGCA CCGCCGAGAA CTACGTCCAG
TACCACACCA GCATCGAAGT GAGCATGACG ATGCTGCTGA AAACCACCCT CCGTATGCGC
CCCGACCGAA TCCTGGTCGG CGAAGTCCGT GGCGAAGAAG CACTTGACCT GCTTGACGCC
TGGAACACCG GCCACCCAGG CGGTGCAGCC ACCCTCCACG CCGATAGCGC GCAAGAGGGC
CTAGTTCGTT TGAAGTCGCT TGTTTCCCGG AATAAGTCGG CTCCATCCGA AATTGAACCG
CTGATAGGCG CGGCGGTTCA TGTCGTTGTT CACATCGCCA AAACCCCGGA CGGCTCGCGT
CGTGTGCAGG AAATCCTTGA GGTTTCCGGC TACGTCAACG GCCAGTACAT CACCAAGTCC
CTTTAA
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| Protein sequence | MSDQDTEHDS IKTRARKKLE RDMGPTLLEA LHDPKTQEIL LNADGKLWLE SQGKRLRCIG
TLRRAQAQAI IETVAGYHGK EVKRDSPLLE GEFPIDGSRF AGQLGPVVTG PTFAIRKKAI
AVFTLAQYVE RGIMTEAQKQ AIERAAAAHK NILVIGGTSS GKTTLVNAII QAMVDNDPLE
RFIIIEDTGE IQCTAENYVQ YHTSIEVSMT MLLKTTLRMR PDRILVGEVR GEEALDLLDA
WNTGHPGGAA TLHADSAQEG LVRLKSLVSR NKSAPSEIEP LIGAAVHVVV HIAKTPDGSR
RVQEILEVSG YVNGQYITKS L
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