| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4267 |
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| Symbol | |
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| ID | 4670474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008766 |
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| Strand | - |
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| Start bp | 15902 |
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| End bp | 17320 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639826939 |
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| Product | conjugal transfer protein TrbI |
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| Protein accession | YP_974101 |
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| Protein GI | 121582572 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.119587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00641799 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGAAA ACGCCGATCA GATGGCACCT GACGCTTCGC CTGGCGAAGT GTCCAAGAAG
GCGGGCGTCC GTCGCGTCAA CAACATGCCC ATGTACATCC TCGGCGGCGT CCTGCTGTCG
TTCGTGCTGG TCATGGCCCT GGTCGCGGCG GATCGCGCGG CCAAGCAGAA CGCGCCGGCG
GATGGCCCGA AGGAGAAGGC CGGCAGCACG TCGATGTTCG CCAAGGAGAT CGCGGGCGAC
AAGACCGGCG GCTTGATCGA GCCGGCAAGC CCGCTCAAGG TGCCCGACAT GCCGACCGGC
CCCGCCTCGG CCCCCCTGGA GATCGCGCGG CCGTCCAACC CGGACGCGCC GCCGGCCCCG
CCGGCGAACC CTGGCAACCC CGGCCAGCCG GTGAACGACG ACGAGGCCCA GCGCATCCGC
ATGGCGAAGA TGCAGATGTT CGGCGAGGCC GTGAAAGCCA AGACCACCGT GCGCGTGGAT
GCTCCGCGTA GCAACGGCTC CGCGCCTGGT GGCCCGAGCA CCTACACCAG CACGCCGCAG
ACGCGCGATG AAATGCTGAA CCGCATCGCA GCGGTGCAGC AGCAAATCGA CGCGCAGCGC
AGCAACGATC CGACCGCCGC CTATCAAGCG CGCCTGGCGC AGATTCGCGG CATGGGCGTC
GGTGGCAGCG CGGCCCCGGC CGCCGGCGGC ATGGGCGCGG GCGGTGCGCC GCAGCTCCTG
CAAACCTCGA CCAGCGGCGG CGGGCGCAAC AGCATGGCGC AGTTCGGCCA GGGTGGGCAG
GGCGACCGCT GGAAGCTGGA TTCGCAGCCG GAAGCGCCGC GCACGCCGTT CGAGCTGCGC
GCCGGCTTCG TGGTGCCGGC CACGCTCATT TCGGGCATCA ACTCCGATCT GCCGGGCCAA
ATCATGGCCC AGGTCGCGCA GGACGTGTAC GACACGCCGA CCGGCAAGCA TCTGTTGATC
CCGCAAGGCT CGCGGCTCGT CGGCTCGTAT TCGAGCGATG TGGCCTACGG CCAGGCGCGC
GTGCTGGTCG CGTGGCAGCG CATCGTGTTC CCCGATGGCA AGGCGATGGA CATTGGCGCG
ATGCCGGGCG CGGACAGCGC CGGGTACGCG GGCTTCAACG ATCAGGTGAA CAACCACTAT
GTGCGCCTGT TCGGTTCGGC CTTCCTCATG TCCGGGGTGA CGGCTGGCAT CACCTACAGC
CAACGCCAGA ACCAGGCCCA AAACACCTAC GGCGCACCGA GCGCCAGCAG TGCCCTAAGC
GAAGCCCTCG GCCAGCAGCT CGGCCAAGTC ACGGCGCAGC TCATCGCCAA GAACCTGAGC
ATTTCGCCCA CGCTGGAAAT CCGGCCCGGC TATCGCTTCA ACGTCGTGGT TACGAAGGAC
ATGACGTTTT CCAAGCCCTA CCGTTCCTTC GACTACTAA
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| Protein sequence | MTENADQMAP DASPGEVSKK AGVRRVNNMP MYILGGVLLS FVLVMALVAA DRAAKQNAPA
DGPKEKAGST SMFAKEIAGD KTGGLIEPAS PLKVPDMPTG PASAPLEIAR PSNPDAPPAP
PANPGNPGQP VNDDEAQRIR MAKMQMFGEA VKAKTTVRVD APRSNGSAPG GPSTYTSTPQ
TRDEMLNRIA AVQQQIDAQR SNDPTAAYQA RLAQIRGMGV GGSAAPAAGG MGAGGAPQLL
QTSTSGGGRN SMAQFGQGGQ GDRWKLDSQP EAPRTPFELR AGFVVPATLI SGINSDLPGQ
IMAQVAQDVY DTPTGKHLLI PQGSRLVGSY SSDVAYGQAR VLVAWQRIVF PDGKAMDIGA
MPGADSAGYA GFNDQVNNHY VRLFGSAFLM SGVTAGITYS QRQNQAQNTY GAPSASSALS
EALGQQLGQV TAQLIAKNLS ISPTLEIRPG YRFNVVVTKD MTFSKPYRSF DY
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