Gene Ajs_4183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_4183 
Symbol 
ID4670405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008765 
Strand
Start bp19820 
End bp20413 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content55% 
IMG OID639826857 
Producthypothetical protein 
Protein accessionYP_974019 
Protein GI121582487 
COG category 
COG ID 
TIGRFAM ID[TIGR02761] type IV conjugative transfer system protein TraE 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000132578 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000422379 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACCAG ATAAAGCAAT CAATGAGCGG GACAAGTTGC AATCGCAAGT CCGCTTCCAC 
CGCGCGATGA ACGCGGGCCT GCTGGGCACT CTGTTTTTCG GGGTGCTGCT GCTGGGCTTC
GTCGTCGTGC GCGACACAAC CAAGATCGTG CCGCCTGAAG TTAAGCGGCC CTACGAGATT
GGATCGAACT ACGCCAATAA GGACTACCTG CTGGATATGG CCGGTTATGT CCTGGGCACG
GTGTTGACCG TCACGCCGGA GACGGTTGAT TACAACAACA AGGTGATTCT CAAGATGGCC
GACCCGGACG GCTACGCCGG GTTGAAGACC GCGCTTGATG CGGCCGCAAT GCGGCTCAAA
CAGGAGCGAG TCACCACTAT TTGGGTTCCT CGCAAAGAGG AAGTCAGCGA GCAGGACAAG
CGCGTGAAGG TCAGCGGAAA ACTCAAGACC TTTATTGCCG ACAAGCTCAC TTCCGAACGC
GAGAAGGACT ATCTCGTTGA ATTCACCATC ACTACCTCGG GGCGTCTCTA TGTTTCCAAG
ATCGAAGAAA TCGTTAAGCG CGATCCTTCT GCTAACAAGC CTGCTGGCAA CTGA
 
Protein sequence
MAPDKAINER DKLQSQVRFH RAMNAGLLGT LFFGVLLLGF VVVRDTTKIV PPEVKRPYEI 
GSNYANKDYL LDMAGYVLGT VLTVTPETVD YNNKVILKMA DPDGYAGLKT ALDAAAMRLK
QERVTTIWVP RKEEVSEQDK RVKVSGKLKT FIADKLTSER EKDYLVEFTI TTSGRLYVSK
IEEIVKRDPS ANKPAGN