Gene Pnap_4730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4730 
Symbol 
ID4685921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008760 
Strand
Start bp111604 
End bp111969 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content64% 
IMG OID639826720 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_973883 
Protein GI121583452 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.167387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAC TCATCAAGCT CCGCCAGCAA ATCGCCGAGA TGGAAAAGCA GGCCGCGGAT 
CTGCAGAAAA AGAACCGGCC CGCCGTGCTG GCCCAGTTGC GCGAGCAAAT GGCCGCCTAC
GGCATCACGG CTGATGAACT GAGCCGTCCG GCGGCCAAAG CCACCAAGCC CAAGGCGACG
CTGGCCAAGC CTGCGGCGAG CCCGACCAAG GGCAAGAAGC CCGTAGTGCA TTCGCCCGCG
AAATACCGCG GCCCCGAAGG CCAGGAGTGG AGCGGCCGGG GAACGGCGCC CAAGTGGCTC
AATGATTTGC TGGCGGGCGG CAAAACCCGG GACGATTTAC TGATCCGACA GGACACTGCA
GCGTAG
 
Protein sequence
MNELIKLRQQ IAEMEKQAAD LQKKNRPAVL AQLREQMAAY GITADELSRP AAKATKPKAT 
LAKPAASPTK GKKPVVHSPA KYRGPEGQEW SGRGTAPKWL NDLLAGGKTR DDLLIRQDTA
A