Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4696 |
Symbol | |
ID | 4685891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008760 |
Strand | + |
Start bp | 78617 |
End bp | 79819 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639826690 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_973853 |
Protein GI | 121583422 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.750931 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 0.0866563 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGCGT TCAAGGCTGG CCACGAACGG CAGCGGCTTC GACCACCGCG ACACAGTATG CACAATAGGC ACATGTCCGA AACTCCTATC CTTGACAGCC GTCCTGACGA ATGGGTCAAT CCCGCCCCGA GTGCCGCGCC CTACGCGCTG CAGTACCCCT GTGGCGAGCC GCCCGCTTCT GGCCAGGTGC GCGAGGTCGC GCCCGGCGTG CTGTGGCTGC GCATGCCCTT GCCGTTTGAG CTCGACCACA TCAACCTGTG GGCGCTGGCC GACGAAGACG AGCACGGCCC CGGCTGGGCC ATCGTCGATA CCGGCACCAA GACGCCCGAG GCACTCGCCG CCTGGCGCCA GTTGATCGCT GCCGACGGCC CGCTGGCCGC CACGTCCCAA GGCGCGCGCA TCACGCGCAT CTTGTGCACC CACATGCACC CCGACCATGT CGGCATGGCC GGCTGGCTCA CGCGCAAGTT CGGCTGCCGG TTGTGGATGA CACGGCTCGA ATACCTGACC TGCCGCACCC TGGCGGGCGA CACCGGCCGG GAGGCGCCCG ACGAGGCCAT CAGCTTTTAC CGCCAGGCCG GCTGGAATGA GGAAGCGCTC GATGTCTACC GAACCCGCTT TGGCGGCTTT GGCAAGTACA TGCATGCGCT GCCCGACAGC TTCCGGCGCA TCAGTGACGG CGAGACCCTG CGCATCGGCG CGCACGACTG GCGCGTCATC GTCGGCCGAG GCCATTCGCC CGAGCATGCC TGCTTGCTCA GCGACGAGCT GGGCGTGCTG GTGTCTGGCG ACCAGGTGCT GCCGCGCATC TCGTCCAATG TGAGCGTGTT CCCCACCGAG CCGGATGCCG ACCCGCTGGG CGACTGGATC GCGAGCATCG CTCACCTGCG CACCACGCTG GGCGATGACC TCTTGGTGCT GCCGGCGCAC GGGGAGCCCT TTCGTGGCCT GCACGCCCGG CTGGACCGCC TGGCACAAGG CCATGACCGC GGCCTGGAGC GGCTGCGCCG AAGCCTGGCC GATAGCCCCA GGCGTGCGAT AGACGTCTTC GGCGCGCTGT TCGCCCGGCC GATCGACAAC AATGGCCACC TGCTGGGCCT GGCCACAGGC GAAAGCCTGG CCCACATCAA CCACCTGCTG GCGCGCGGCG AGGCGGTGTG CGAAATGGGC GTGGACGGGG TGCGCCGTTA CCGGATGAAG TGA
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Protein sequence | MEAFKAGHER QRLRPPRHSM HNRHMSETPI LDSRPDEWVN PAPSAAPYAL QYPCGEPPAS GQVREVAPGV LWLRMPLPFE LDHINLWALA DEDEHGPGWA IVDTGTKTPE ALAAWRQLIA ADGPLAATSQ GARITRILCT HMHPDHVGMA GWLTRKFGCR LWMTRLEYLT CRTLAGDTGR EAPDEAISFY RQAGWNEEAL DVYRTRFGGF GKYMHALPDS FRRISDGETL RIGAHDWRVI VGRGHSPEHA CLLSDELGVL VSGDQVLPRI SSNVSVFPTE PDADPLGDWI ASIAHLRTTL GDDLLVLPAH GEPFRGLHAR LDRLAQGHDR GLERLRRSLA DSPRRAIDVF GALFARPIDN NGHLLGLATG ESLAHINHLL ARGEAVCEMG VDGVRRYRMK
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