Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4688 |
Symbol | |
ID | 4685883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008760 |
Strand | - |
Start bp | 68146 |
End bp | 69294 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639826682 |
Product | integrase catalytic subunit |
Protein accession | YP_973845 |
Protein GI | 121583414 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.03329 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCATAC AAAGCGATGG CAAAGTCGCC ATTCGTGATC TGGCAAATGG TCAATTGCTG ACAACAAGCG CGGTAGAGCT TAGCGCGCCG CCCATTGCAT CTGGTCTGAG CGCAGCTAGC GCCACAGCCC TTAATGAAGC AACAGACTCC CAGTGGGAGG ACGCTCGGCG CCGCGAGTCA GCAGTCATCG CGATTCTCAA GACCAACGAT GTGGCCCAAC ATGTCTCGCG TGTCGCAGTT GAGTTTGGTG TGTCACGGCG CACCGTCTTT CGATGGCTCG CCGTTTATCG CGAGACGCCA CAGACATCTG CCTTGCTGCA CCGCCCGATG GGCCCACCTG TTGGCGGCAG GCGCATTGAC GCGCACCTTG AGCGCTTGAT CACCGATGTC ATCAATGATG TCTATCTCAC AAAGGTGCGC GCAAAAAAGG AGGAGGTCGT GCGCATGGTC CATCTGCGCT GTGCCGCCCA GGGCTTGAAG CCGCCTTCTC GTAAACCCAT CCTTGCCCGG CTCAAAGCTC TCGACACCAG AGAAGTGGCC AAGGCAAGAC TGCAGCCGGG CGAGGCTGCA TCGCTGACCG ACTTTGTGCC AGGACGGTAC CGAGTCAACC AGCCACTTGG CGTCGTACAA ATTGACCACA CGCTTGTCGA TCTGATTGTC GTTGACGAAG CAAGACGACT TCCCATAGGG CGGCCATGGC TGACGCTGGC CGTGGACGTT GCAACCCGTG TCATTGTCGG GTTTTACCTG TCCCTGGAGG CGCCATCATC GACCTCCGTG GCGCTGTGTC TGAGTCACGC AACTTTGCCC AAAGAGCTTT GGCTCAAGCA GCGCGGCCTC AACTGCAATT GGCCCGTCTG GGGTTTGCCC CAGGCGGTGC ATGCCGACAA TGGCGCCGAC TTCACCGCAG CAGCACTGCG CCGAGGGTGT GACGAACACG GCATCCGGTT GATTCTTCGC CCGGTCGCGA CGCCGCATTA CGGGGGGCAT ATCGAACGCC TGATCGGAAC CCTGATGGGC CGGGTTCATC TTTTACCAGG AACAACCGGC TCCAATCCGC AAGACAAGGG AGACTATCCC TCTGAGGCGC AGGCACGAAT GACCCTGAAC GAGTTGGAGC AGTGGTTGAC ACTTGAAATA TGCGAGTAA
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Protein sequence | MRIQSDGKVA IRDLANGQLL TTSAVELSAP PIASGLSAAS ATALNEATDS QWEDARRRES AVIAILKTND VAQHVSRVAV EFGVSRRTVF RWLAVYRETP QTSALLHRPM GPPVGGRRID AHLERLITDV INDVYLTKVR AKKEEVVRMV HLRCAAQGLK PPSRKPILAR LKALDTREVA KARLQPGEAA SLTDFVPGRY RVNQPLGVVQ IDHTLVDLIV VDEARRLPIG RPWLTLAVDV ATRVIVGFYL SLEAPSSTSV ALCLSHATLP KELWLKQRGL NCNWPVWGLP QAVHADNGAD FTAAALRRGC DEHGIRLILR PVATPHYGGH IERLIGTLMG RVHLLPGTTG SNPQDKGDYP SEAQARMTLN ELEQWLTLEI CE
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