Gene Pnap_4688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4688 
Symbol 
ID4685883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008760 
Strand
Start bp68146 
End bp69294 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content59% 
IMG OID639826682 
Productintegrase catalytic subunit 
Protein accessionYP_973845 
Protein GI121583414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.03329 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCATAC AAAGCGATGG CAAAGTCGCC ATTCGTGATC TGGCAAATGG TCAATTGCTG 
ACAACAAGCG CGGTAGAGCT TAGCGCGCCG CCCATTGCAT CTGGTCTGAG CGCAGCTAGC
GCCACAGCCC TTAATGAAGC AACAGACTCC CAGTGGGAGG ACGCTCGGCG CCGCGAGTCA
GCAGTCATCG CGATTCTCAA GACCAACGAT GTGGCCCAAC ATGTCTCGCG TGTCGCAGTT
GAGTTTGGTG TGTCACGGCG CACCGTCTTT CGATGGCTCG CCGTTTATCG CGAGACGCCA
CAGACATCTG CCTTGCTGCA CCGCCCGATG GGCCCACCTG TTGGCGGCAG GCGCATTGAC
GCGCACCTTG AGCGCTTGAT CACCGATGTC ATCAATGATG TCTATCTCAC AAAGGTGCGC
GCAAAAAAGG AGGAGGTCGT GCGCATGGTC CATCTGCGCT GTGCCGCCCA GGGCTTGAAG
CCGCCTTCTC GTAAACCCAT CCTTGCCCGG CTCAAAGCTC TCGACACCAG AGAAGTGGCC
AAGGCAAGAC TGCAGCCGGG CGAGGCTGCA TCGCTGACCG ACTTTGTGCC AGGACGGTAC
CGAGTCAACC AGCCACTTGG CGTCGTACAA ATTGACCACA CGCTTGTCGA TCTGATTGTC
GTTGACGAAG CAAGACGACT TCCCATAGGG CGGCCATGGC TGACGCTGGC CGTGGACGTT
GCAACCCGTG TCATTGTCGG GTTTTACCTG TCCCTGGAGG CGCCATCATC GACCTCCGTG
GCGCTGTGTC TGAGTCACGC AACTTTGCCC AAAGAGCTTT GGCTCAAGCA GCGCGGCCTC
AACTGCAATT GGCCCGTCTG GGGTTTGCCC CAGGCGGTGC ATGCCGACAA TGGCGCCGAC
TTCACCGCAG CAGCACTGCG CCGAGGGTGT GACGAACACG GCATCCGGTT GATTCTTCGC
CCGGTCGCGA CGCCGCATTA CGGGGGGCAT ATCGAACGCC TGATCGGAAC CCTGATGGGC
CGGGTTCATC TTTTACCAGG AACAACCGGC TCCAATCCGC AAGACAAGGG AGACTATCCC
TCTGAGGCGC AGGCACGAAT GACCCTGAAC GAGTTGGAGC AGTGGTTGAC ACTTGAAATA
TGCGAGTAA
 
Protein sequence
MRIQSDGKVA IRDLANGQLL TTSAVELSAP PIASGLSAAS ATALNEATDS QWEDARRRES 
AVIAILKTND VAQHVSRVAV EFGVSRRTVF RWLAVYRETP QTSALLHRPM GPPVGGRRID
AHLERLITDV INDVYLTKVR AKKEEVVRMV HLRCAAQGLK PPSRKPILAR LKALDTREVA
KARLQPGEAA SLTDFVPGRY RVNQPLGVVQ IDHTLVDLIV VDEARRLPIG RPWLTLAVDV
ATRVIVGFYL SLEAPSSTSV ALCLSHATLP KELWLKQRGL NCNWPVWGLP QAVHADNGAD
FTAAALRRGC DEHGIRLILR PVATPHYGGH IERLIGTLMG RVHLLPGTTG SNPQDKGDYP
SEAQARMTLN ELEQWLTLEI CE