Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4674 |
Symbol | |
ID | 4685870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008760 |
Strand | - |
Start bp | 58612 |
End bp | 59625 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639826669 |
Product | curli production assembly/transport component CsgG |
Protein accession | YP_973832 |
Protein GI | 121583401 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1462] Uncharacterized protein involved in formation of curli polymers |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.501006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 0.0721593 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAAAG TGAGTTGCGT GTTTCCAAAA CAGAAGCTTT GCCATGTGAC AAAGCCTCTT CTGATTATTT TGGCCGCAGG CCTGACAGCA TGCGCAGTAC AGGCACCGCC CGTTGCCCAG AAAGACGCGC CACAGTCCCT GGCCACGCAA AAAGCTGCCC AGCAGGCCGT CGCATCGCAG GCGCCCGCCA CCCCGACACT GAAAAGAAAA ATCGCGCTGG GCCGCATCAC CAACGAAACC AGTTACGGCC AGTCGCTCCT GCGTGATCGG CATGACGATC CATTGGGCAA ACAGGTGACG GATCTGATGA GCAAGGCGCT CACGGAGTCG GGCGCTTACC TGGTCTTTGA GCGGCCGGAC ATCGGCCGCA TCCAAGCAGA GGGCCGGCTG ACCGACACCA AGCTCAACAT CGTCGGGGTT GACGCCTTGA TCATTGGATC ACTGACTGAA TTTGGCCGCA AGGCAATTGG CGCCACAGGC TTTGTGTCCT CCAGCAAGCG ACAGGTCGCT TTTGCCAAGG TGGACATACG GGTGGTTGAC GTGAACACGG GTCATGTGTT TTTCGCTACC TCAGGTGCCG GCGAAGCATC CACGGAGACA GCATCGACCT TCGGATTCGG CTCGCAGGCA GGCTACGACG GCACGCTCAA TGACGCAGCT ATCCGACAGG CCGTTGCCGA AGCCATCAAC CGCCTGTCGG TGGAGATGAG CGGGCGGCCC TGGCAGACGT ATCTGCTGAA GGTTGACGGA TACCGCGTCT TTATAGGCGG CGGCAAGAGC CAAGGAGTCA AGCCCGGCAT GCAGTTCTCT GTCCAGACCC AGGGTGAGCA AGTCAAATCC CCTCAGACAG GGGCCATGGT GACGCTGCCA GGTCAGGCTA TCGCGCAGAT CCGGGTCGAC GCGCTGTTTG GCGACAGCGA ACTCAACGAA GGCGCTGTCG CGTCCATCGC GTCCGGTTCC CTGGCCGGGT ACAAGCCCGA GCAGTTGCTC ATTCGTTTCG AGGGAGCCAA ATAA
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Protein sequence | MIKVSCVFPK QKLCHVTKPL LIILAAGLTA CAVQAPPVAQ KDAPQSLATQ KAAQQAVASQ APATPTLKRK IALGRITNET SYGQSLLRDR HDDPLGKQVT DLMSKALTES GAYLVFERPD IGRIQAEGRL TDTKLNIVGV DALIIGSLTE FGRKAIGATG FVSSSKRQVA FAKVDIRVVD VNTGHVFFAT SGAGEASTET ASTFGFGSQA GYDGTLNDAA IRQAVAEAIN RLSVEMSGRP WQTYLLKVDG YRVFIGGGKS QGVKPGMQFS VQTQGEQVKS PQTGAMVTLP GQAIAQIRVD ALFGDSELNE GAVASIASGS LAGYKPEQLL IRFEGAK
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