| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4655 |
|---|
| Symbol | |
|---|
| ID | 4685852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008760 |
|---|
| Strand | + |
|---|
| Start bp | 42183 |
|---|
| End bp | 42758 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639826651 |
|---|
| Product | stress protein |
|---|
| Protein accession | YP_973814 |
|---|
| Protein GI | 121583383 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2310] Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.117169 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATCA GTCTACAAAA AGGCGGCAAC GTCAATCTGA GCAAAGAAGC ACCCTCACTC
AAAAAACTAG TCATCGGGCT CGGCTGGGAT TCACGCGCCA CGGACGGTGC TGCCTTCGAT
CTTGACGGAA GTGCCTTTCT ATTGAAGGTG GATGGAAAGG CTCGCTCCGA CGCCGACTTC
ATCTTCTACA ACAACTTGAA ATCCACCGAT GGCTCTGTCA CCCACGCTGG CGACAACACA
AGCGGAACCG GTGAAGGAGA CGATGAAAAA CTCACTATCG ACTTGGCCAT GGTTCCAGCT
GAAATCGAGA AAATAACCAT TGGTGTAACG ATTCACGACG CTGAAGCACG CAAGCAGAAC
TTTGGCATGG TCGGCAAGGC CTACATTCGT TGTCTCGACG CCAATGGCGA CAAGGAAATC
GCACGCTACG ACCTCTCCGA AGACAGTTCG ACTGAGACGG CGATGATTTT TGGCGACATC
TATCGTGCTG GCGCTGAATG GAAATTCAAG GCTGTCGGAC AAGGATTTGC AGGTGGTCTC
GGCCCTCTGG CACGCTCTTT CGGCATTGGC ACTTAA
|
|---|
| Protein sequence | MAISLQKGGN VNLSKEAPSL KKLVIGLGWD SRATDGAAFD LDGSAFLLKV DGKARSDADF
IFYNNLKSTD GSVTHAGDNT SGTGEGDDEK LTIDLAMVPA EIEKITIGVT IHDAEARKQN
FGMVGKAYIR CLDANGDKEI ARYDLSEDSS TETAMIFGDI YRAGAEWKFK AVGQGFAGGL
GPLARSFGIG T
|
|---|
| |