Gene Pnap_4927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4927 
Symbol 
ID4685777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008759 
Strand
Start bp117108 
End bp121433 
Gene Length4326 bp 
Protein Length1441 aa 
Translation table11 
GC content62% 
IMG OID639826569 
Producthypothetical protein 
Protein accessionYP_973733 
Protein GI121583297 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.587523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.87386 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAA TCACTCGAAT CTACGTTGGC AATTACGGCA TCGACATGGC GTGGTACGAC 
GGCATCACTT TTGACCTCAC CGACCCGGAT GACGGTTACC CGACGGACAC CATCATTAAT
CTGGAAAACG GAGGCGGCAA GACGACGTTG CTGAGCTTCA TCTTTTCCTG CTTTGAGACC
AGTCAGGAAC GATTCCTCAA GCATATCCAG AACAAGAACC ACCGATTCAG CCAGTACTTC
GCCAAGGATG GACTACCGGG AATCGTGCTC ATCGAGTGGC TCATGCCTGC GCGGGTGGCG
GGAGGCGCGC CTTATCGCCT CGTGACGGGT CAAGCCGTGG CGGTCAGGAC AAATGCCGAG
CGGGACGAGG TCGACCGCGT GTTTTTCTCC TTTGAAGCAA GCCAGGGCCT TACTTTCGAG
ACGGTCCCGG CGCCCAAGCT TTGCTTCGCC CCGGTCACCA ACATGAACGA GTTCAGCCGG
TGGATGCATG AGTCGAACAA AACGTCGCCT GATTTCTTTT ATACCCGTAC CCAGAGCGAC
TGGCAAAAGC ACCTCCGCGA CGAGCGCCTC ATTGATGTCG AAATGCTGCA GCTGCAGGTG
AACTTTTCAG CGCAGGAAGG CGGCATCGAC ACCGGCTTTT TGACCTTCAC CTCGGAGCCG
GAGTTCATCC GCAAGTTCTT CGACCTGACC CTGGACCCGG AACGCTCGGC GGCCGTCCGG
CTGGCAGTCG TCAACACCTG CGACAAGCTC AGCCGCAGGC CACACTTCCA GCAGTGCCTG
ACGGAGCTGA CCAAGCTGCG CGACAACCTG ACCCACTTCG ACGAGGCGGC GGGTGCCTTC
GCCACCACTC GCGCGTCCCA GGGCGAGGCT GTCCGCCGAG GCTCCGGGCT GGCCTTAAGC
CTCGACACGA TGAACCGTGA CCGAACGCAG CTAGCTGCCG ACGAAGCGGC TCGGGCGACA
GACCAGGAAC TCCTGGCCAA CAAGTCAGGC CAAATGGCAA GCAGCCGTGC CGATGACGTC
CTGGTTCTTA CGGCCCTGCA ATACCTTCGG CGCAAGGAGC AAGCCGAGGC GGCAAAGAAA
CAAGCCGATG ACCTCTTGAG CAACGCGCGC AACAAGCTCG TCCACGTGAG GGCCGCCCAA
GCCCGCGGCG AGCTCGATGC CCTGGACGCG CAACTGGCGC AGCTTGAATC TTTGTCCGCA
GTAGCCCAGG AACAGCTCGA GCCTTGGCGC GACAACGCTG AAAAGCAAGG TGCTCTGCTA
CGCCGCGCGC TGTACGCAGG AGAGCAAAAA CTGCAAAAAG CCGCAGCGGG AGAAGCCTCG
CTAGAGGTGG CCGCCCATCA AAACCAAATT GCCCTCAGCA AGGACCTGGC TACGCTGACC
AAGGAGGAAC AGTACCTCTT TCAAGTGCAG GCGAACCTGA AAGCAATGGA AAATGCGTAC
ACCGCAACAA AGGCGCAACT CATCCGCGAG GGGCAGCTGG AGCCAGAAGA AGAGTCCACC
GTGGCAGCCG CCCGGTATGC CAGCACGGTC ACTGCCAAGC GTGCCCGCGA ACAGGAACTC
ATAGCGCAGG CCCAGGGATT TCGCGCCTTG GAATCGGCGT CCAGAGCCAA AAGCAAAAAT
GAGACAGCAG AAGCCGCACG CCTCAAAGCG GAAATTGGGC CGCTCCAGCG GTTCATCGCC
GACGCAGAAG TTGAGCGCGA GCAGCTGTCC CAGCTTCCCA TCCTTCGACA GGCGGCTGAA
GCAGAGACGG CCGACCCGGA CTCCGCCGCA CTGGTACCCG CCCTGGACCG GCTGATTCAT
GGAAGCGAAA GCGAGGTGGC CCAGTGCGAG GTGCATCTTG CTGCGCTGCG GTCGAGCAAG
GCTGCCATCG TTGAGACCGG GGTTTCCGGG GCGTCGCGAG ACGTCAACGA GGTGGTGTCT
CGCCTGCGAG AGCTTGGGGT CAAGTCCGCA GCCCCCTTCA ATACCTACCT TGCCCGGGCT
CTGCCCGACG CTGACAAGGC GCGCGCCCTC GTGGCGAGCA ACCCTGCCCG ATTTCTGGGC
GTGTGCGTGG CATCTGCCGA GCTTGACAAA GCACGAAGCG TCTTCAGCCC GTCCCTTCAA
CTGGTAGCGC CAGTCATGGT GTCGAGTACG GCGCTGGAGT CTGACCCGGT GGAAGAAAAC
CGGTTCGTCC TGCCAGCCGC CGATGACGCG GCATTCAACT ATGCAGCCGC CACAGAGCAC
CTGACCCACC TCGACGTACG CATCAACACG GAAGAGCAGC GGCGCGAGGT GTATGCCGGG
CGTCAGCGCG CAGCGCTGGC CGCCAAGCAG CGCCTGCAGG CCTACGGTGC TCGTTTCGGG
GGCGGCGCTG TCAGTCGTGC GGGAATTGAC GCGGCTCGTT TGGCAGCGGA GGGCCTAGCG
GCTTCAGAGC GTGCTCAAGA GGCCGAGGGA CTCGCCAGTG CCTCCCAAGA AAAAGCGGAG
GCCGCAAGAA AGGAGGCAGA CGAGTGCTCC AAGGCAGCCG ACCGTGCGCA TAGCGACGGG
CGTGCCATTG AGCGGTTTGC CCGGGACCAC GAAGCTGGCC GCGCGGCGTG TCTGGCTCGC
CTGGACTCCC TGCTGGTAGA ACTTGCCGCC AAGGGCGACC TGCGAGACCG CATATCCACT
GAACTGGGCG ACAGCGCCGG AGCGGAAAAA GCCGCATACC GCCGCAAGCT TGAGCACCAG
ACCGAAGCAG CTCACCTTGG CGCTGAGCGC GGAGCCCTAA AACACTACAG CAAGAGCTTT
GCGGCCGAGC AGCACCTTGC AGAGCATCCG CAGGAGTTGG CGGTCCTGCG AGTCTTGTAC
AGCGACGCGG AGAAAACCTA CGACGCCGAG GCCGAGACCC GCCTGGGCAT CGTGCATGAA
AAGCAAGACT CAGCCAGGAA AGACCGAGCC AGCAAGGGCC AGGCGTTCAC GAACGCGTTC
CCCGGCGTTA AGGCTAGCGA CATCAGCCCC TACCTCAACG CGAACTTCGC CGTTTTGCTG
CCCGCGACCC AGCAGGAGGT TGAAGAAACC GATAACGCGT CCCGCTCGGC TGACAGCAAG
TGTGCTGTTG CAGCCAACGA ACATTCCCGC TATCTCAAGG CCAACAAAAC CAACTCTGCC
GCCAGTGCTG AGATGCTGGC GCTGAACGAT GACGCGCTCC ATGAAGCTAT CCAGACGTCA
ACGCAGGACC AAATCCAGGC TGCGGCGACA GCCCTGGCAG CAAAATTAGA AGCAGGCCGT
TGCCGAGACC GTGCCCGCCA AGCTCGGGTA GACGCAACGC AGGCCCTGAA CACAACCAGC
GCGCTGCGTG CGTCGCTCTC GCTGCCTGAG CTGCTGGATG CTGAGCCAGA ATTACTGCTC
GAGGACATCG CCGCCCAGGC AAACCAAGTC ATTGCCGACT TCCAGTCAAA AGCCAAGTCG
GTTGAAAGTG CCCGAAAGAA GGCCTATAAA GCGTTCGAGG ACCTCAAGAG CACAGCCTCG
ACGCCAGCAC TTCAAAAAGT TGAACCCGAT ATCGCCAGCC AGCTTTTGCG CAACGACTTC
GAAGCGGCCT GCGCAGACAG CACCCGGCTG CTGGAGGGCA TTGAAGACCG CATCGGCACG
ACCCAGTCCA GCCTGGATGG AATGACCTCC GACTTCGAGA ATTGTGTGGG CGAGCTGTCC
AACCTCACCA ATGGTGCCAT CACCTTGCTC AACTCGGCGA CGACCAACAA GAAGGTGCCC
GTGGGTGCCC CCTACGTTGG CGGCAAGGCG ATTCTCAAGA TGCGCGCCCG CTTTCACGAA
CTCGGCCAGG ACGTTCGCCG GCAACACCTG CGCAGCTACC TCGACTCCTT GATTGGCAAC
AACACCGTTC CTGCCAAAGG CCCCGAGCTG GTGGCAGAAG CGCTGCTGCG CATCCACGGC
AAGCCTCTGG GCATGCAGAT GCTGAAGATG GTTCCGGACG AAAACCTTCA GTACGTTGCG
GTTGACAAGA TTCAGAACTC GGGCGGTGAA GGGGTGGTGA TGGCCATGTT CCTGTACATG
GTCATCAACC AGCTGCGCTC CGAGACCCAG GCCAAGCTCA AGAAGGCCGG TGGCGGCCCG
CTCATCCTGG ACAACCCGTT TGCCAAGGCC ACCACCCCGA CGCTCTGGAA GGCCCAGCGC
ATGCTGGCCC AGGCCATGGA CGTCCAGCTC ATCTTCGCCA CCGCCCTGCC AGACTACAAC
ACCGTGGGCG AGTTTGGCCG ATTTGTTCGG TTGCGCAAAG CGGGCAAAAA CACCAAGACC
GGGCGCTGGC ACCTGGAGGC CGTTGACTTC AAACTCAGCC CGCAGGCCGA GGCGTTGGCA
GCATGA
 
Protein sequence
MQKITRIYVG NYGIDMAWYD GITFDLTDPD DGYPTDTIIN LENGGGKTTL LSFIFSCFET 
SQERFLKHIQ NKNHRFSQYF AKDGLPGIVL IEWLMPARVA GGAPYRLVTG QAVAVRTNAE
RDEVDRVFFS FEASQGLTFE TVPAPKLCFA PVTNMNEFSR WMHESNKTSP DFFYTRTQSD
WQKHLRDERL IDVEMLQLQV NFSAQEGGID TGFLTFTSEP EFIRKFFDLT LDPERSAAVR
LAVVNTCDKL SRRPHFQQCL TELTKLRDNL THFDEAAGAF ATTRASQGEA VRRGSGLALS
LDTMNRDRTQ LAADEAARAT DQELLANKSG QMASSRADDV LVLTALQYLR RKEQAEAAKK
QADDLLSNAR NKLVHVRAAQ ARGELDALDA QLAQLESLSA VAQEQLEPWR DNAEKQGALL
RRALYAGEQK LQKAAAGEAS LEVAAHQNQI ALSKDLATLT KEEQYLFQVQ ANLKAMENAY
TATKAQLIRE GQLEPEEEST VAAARYASTV TAKRAREQEL IAQAQGFRAL ESASRAKSKN
ETAEAARLKA EIGPLQRFIA DAEVEREQLS QLPILRQAAE AETADPDSAA LVPALDRLIH
GSESEVAQCE VHLAALRSSK AAIVETGVSG ASRDVNEVVS RLRELGVKSA APFNTYLARA
LPDADKARAL VASNPARFLG VCVASAELDK ARSVFSPSLQ LVAPVMVSST ALESDPVEEN
RFVLPAADDA AFNYAAATEH LTHLDVRINT EEQRREVYAG RQRAALAAKQ RLQAYGARFG
GGAVSRAGID AARLAAEGLA ASERAQEAEG LASASQEKAE AARKEADECS KAADRAHSDG
RAIERFARDH EAGRAACLAR LDSLLVELAA KGDLRDRIST ELGDSAGAEK AAYRRKLEHQ
TEAAHLGAER GALKHYSKSF AAEQHLAEHP QELAVLRVLY SDAEKTYDAE AETRLGIVHE
KQDSARKDRA SKGQAFTNAF PGVKASDISP YLNANFAVLL PATQQEVEET DNASRSADSK
CAVAANEHSR YLKANKTNSA ASAEMLALND DALHEAIQTS TQDQIQAAAT ALAAKLEAGR
CRDRARQARV DATQALNTTS ALRASLSLPE LLDAEPELLL EDIAAQANQV IADFQSKAKS
VESARKKAYK AFEDLKSTAS TPALQKVEPD IASQLLRNDF EAACADSTRL LEGIEDRIGT
TQSSLDGMTS DFENCVGELS NLTNGAITLL NSATTNKKVP VGAPYVGGKA ILKMRARFHE
LGQDVRRQHL RSYLDSLIGN NTVPAKGPEL VAEALLRIHG KPLGMQMLKM VPDENLQYVA
VDKIQNSGGE GVVMAMFLYM VINQLRSETQ AKLKKAGGGP LILDNPFAKA TTPTLWKAQR
MLAQAMDVQL IFATALPDYN TVGEFGRFVR LRKAGKNTKT GRWHLEAVDF KLSPQAEALA
A