Gene Pnap_4909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4909 
Symbol 
ID4685713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008759 
Strand
Start bp88038 
End bp88877 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content57% 
IMG OID639826551 
Producthypothetical protein 
Protein accessionYP_973715 
Protein GI121583279 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00288] conserved hypothetical protein TIGR00288 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0665884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.351144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGTG CGGTGGCAAT TGGCGAAACG CGTGTGGCGG TTCTCGTGGA CTGCGACAAC 
GTGACTCCGG AAATTCTGGA GTACGCCCTG CGCGTGATTG CCCAGTTCGG GCGCGTGGTG
CTGCGCCGGG GCTACGGGAA CCACACCACC CTGGCCAACA AGTGGCAAGA AGCGCTGGTC
CGCCTGGCTT TCACCCCTTG CTTGCAATAC CAGTACGCCT CAGGCAAAAA CACTGCCGAC
ATTGCGCTGG CCTTGGACGC CCTAGAAGCC ATGTTCGATA ACCGGGCCGA CACCTTTTGT
CTGGTCACGA GCGATTCTGA CTTCGCTTAC CTGTGCCGGA AACTACGCGA GCGCGGGGCA
ACGGTTTGCA TCGTTGGAGA GGCGAAGACT CCTGACGCGC TACGCAACGC GAGCGACCAG
TTTTTTGAGT GGGTACGACC CGAACTGACA ACAGCGCTTG CAGTCGACCC CTGGGAAAAA
GCGCAGGCAA AGTGCATAGC CATGAAGCCG GAGCCTGCAA AGCTTGAATT GCCAAAACCT
TCAATCAAAC GCCGCCCCCG GTTCATCGTT GATGCGGTCA CTTTGCTCGC CAGCGATACC
TCGGAAGGAA AAATAGGCAT GGGACTTTTG GGGCAGTATC TCAAACGCAC CGACCCGGCT
TTCTCGCCGA AACTCTATGG ACATTCAGGC TTGCTGGACA TGGTCAAGAC CTACGATTTG
CTGAAGTCTG AACAGGAAGT GGGGGGTCAC TGGTCAGTAA GTTTGGCGCC GAAAAACGAA
CCCGTTGACC TGCAACCCGG TGAAAGCTCT CCCACGAAGA GGTTGACAAC CATTAGCTGA
 
Protein sequence
MNGAVAIGET RVAVLVDCDN VTPEILEYAL RVIAQFGRVV LRRGYGNHTT LANKWQEALV 
RLAFTPCLQY QYASGKNTAD IALALDALEA MFDNRADTFC LVTSDSDFAY LCRKLRERGA
TVCIVGEAKT PDALRNASDQ FFEWVRPELT TALAVDPWEK AQAKCIAMKP EPAKLELPKP
SIKRRPRFIV DAVTLLASDT SEGKIGMGLL GQYLKRTDPA FSPKLYGHSG LLDMVKTYDL
LKSEQEVGGH WSVSLAPKNE PVDLQPGESS PTKRLTTIS