Gene Pnap_4579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4579 
Symbol 
ID4685483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008758 
Strand
Start bp143907 
End bp144353 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content64% 
IMG OID639826425 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_973589 
Protein GI121583148 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAACA AACTATACGT CGGCAACCTG CCTTACACGG TACGTGACGA AGACTTGCAG 
CAATCGTTTG GTCAATTCGG CACGGTCACC AGCGCCAAAG TCATGATGGA GCGCGACACG
GGTCGCTCCA AAGGCTTTGG CTTTGTTGAG ATGGCCAACG ACGCCCAAGC GCAAGCGGCC
ATCAACGGCA TGAACGGTCA GCCTCTGGGC GGGCGCAGCA TTACCGTGAA CGAAGCCCGT
CCAATGGAAG CACGTCCTCC ACGCACCGGC GGCTTCGGCG GTGGCGGCGG TGGCGATCGT
TCTGGCGGAG GCGGTTATGG TGGCGGTGAT CGCTCTGGCG GTGGCGGCGG CTATGGCGGC
GGCCGTTCGG GTGGGGGCGG CTACGGCGGT GGAGATCGTT CTGGCGGCGG TGGCTACGGT
GGTGGTGGTG GTCGCGGCGG CTACTAA
 
Protein sequence
MGNKLYVGNL PYTVRDEDLQ QSFGQFGTVT SAKVMMERDT GRSKGFGFVE MANDAQAQAA 
INGMNGQPLG GRSITVNEAR PMEARPPRTG GFGGGGGGDR SGGGGYGGGD RSGGGGGYGG
GRSGGGGYGG GDRSGGGGYG GGGGRGGY