Gene Pnap_4578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4578 
Symbol 
ID4685517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008758 
Strand
Start bp142679 
End bp143044 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content64% 
IMG OID639826423 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_973588 
Protein GI121583147 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAC TCGTCAAGCT CCGCCAGCAA ATCGCCGAGA TGGAAAAGCA GGCCGCGGAT 
CTCCAGAAAA AGAACCGGCC CGCCGTGCTT GCCGAACTGC GCGAACAGAT GGCCGCCTAC
GGCATCACGG CCGAAGAGTT GAGCCGTCCG GCGGCCAAAG CCACCAAGCC CAAGGCGACG
CTGGCCAAGC CTGCGGCGAG CCCGGCCAAG GGCAAGAAGC CCGTAGTGCA TTCGCCCGCG
AAATACCGCG GTCCCCAAGG CCAGGAGTGG AGCGGCCGGG GAACGGCGCC CAAGTGGCTC
AATGATTTGC TGGCGGGCGG CAAAACCCGG GAAGATTTCC TGATCCGACA GGACACGGCT
GCGTAG
 
Protein sequence
MNELVKLRQQ IAEMEKQAAD LQKKNRPAVL AELREQMAAY GITAEELSRP AAKATKPKAT 
LAKPAASPAK GKKPVVHSPA KYRGPQGQEW SGRGTAPKWL NDLLAGGKTR EDFLIRQDTA
A