| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4569 |
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| Symbol | |
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| ID | 4685525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008758 |
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| Strand | + |
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| Start bp | 133000 |
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| End bp | 136119 |
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| Gene Length | 3120 bp |
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| Protein Length | 1039 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639826416 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_973581 |
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| Protein GI | 121583140 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAGT GGTTACTCGA CAATAGCCTT GCCAACCGGT TGCTGGTGAT CATCGCCGCC
CTGGTGCTGA TGGGCTATGG CGCCTTTACG CTCTCACGCA CTCCGGTCGA TGTGTTTCCT
GACCTCAACA AACCCACTGT CACCGTCATC ACGGAAGCCG GCGGCATGGC GGCCGAAGAG
GTGGAGCAGC TCATCACCTT TCCCCTGGAA ACAGCCATGA ACGGGCTGCC CGGCGTGGAG
ACGGTGCGTT CTGCATCCAG CGCCGGCCTG TCTTTCCTGT ATGTAACCTT TAACTGGAAC
ACCGAAATCT TTCGCGCCCG GCAGATGGTG GGAGAGCGCT TGTCCTCGAT GGAAGAAGGG
CTGCCCGAAG GCACGGTGCC GAACATGGGA CCGATCAGCT CGATCATGGG TGAGATCATG
CAGATCGCGA TTCCCATCGA CACGGCCAAG ATCTCGCAAA TGGCGGTGCG CGAATACGCC
GACTGGGTGC TGCGCCCGCG GCTGCTGGCG ATTGCGGGTG TCGCGCAGGT GGTGCCAATC
GGTGGCGAGG TGCGCCAGTT CCAGGTCCAA CCCAACACCG TGCGCATGTC CGAGCTGGGC
ATTACCCACG AACAGTTGGA AGGCGCGCTC AAGGGCTACT CCAGCAACAC CTCGGGCGGC
TTTCTCGAAC TCAATGGGCG TGAATACTTG ATTCGCAACC TGGGCCGCAC TTCCAGTCTG
GATGACCTGA GAAATCTGGC GCTTACCGCG CGTGATGGCC AACCGATCTT GATGCGGCAG
ATCGCTGACG TGACTTTTGC TGCAGCCATC AAGCGCGGTG ACGCAGGTTT TGAGGGCAAG
CCAGCAGTAA TCCTGAGCAT CCAGAAACAG CCTGCCGCCG ACACCATAGC CTTGACCCGT
GCCATTGAGA CTGCGCTGAC GGAGATGCAA CGCTCGTTGC CGGCCGGCAT GGACAAACCG
ACGGTGACGT TTCGGCAGGC CAGCTTCATC GAGTCGTCGA TCACCACGCT GCAAGGCAAG
CTGATCGCGG CCTCGGGCTT CGTAGCAGTC ATCCTCTTCC TGTTTCTGGG CAATGTGCGC
ACCACCGTCA TCGCGCTGGT GGCAATTCCG GTCTCAATCC TCATCACTGC CCTGGTGTTT
CGCTACTTTG GCATGTCGAT CAACACGATG ACTCTGGGTG GACTGGCCAT TGCGATCGGC
GGGCTGGTCG ATGACGCCGT GGTTGATATT GAAAATGTGA TGCGCCGGCT CAAGGAAGAC
CGGATCAAGC ACCCTGAACA CCGGCTGCAC CCGATTGAGA TCGTAAAGAG CGCCACCATG
GAAGTGCGCT CGGCCATCCT GTATGCCACG GTAATCATCG TGCTGGTGTT CGTGCCGCTG
TTCGCGCTGC CGGGCATGGA GGGGCGACTG TTCGTGCCGC TGGGTATCTC GTTCATCGTC
TCGACACTGG CCAGCCTCGT CGTGTCCATG ACCGTGACGC CAGTGTTGAA CTTTTACCTG
CTGCCGCGCA TGAAATCGCT GGACCACGGC GACACCAGGT TGCTGGCCTG GCTAAAGGCG
CGCTACCGCA TTGGCTTGCA AAGTGTGCTG GCGCGTCCGA AAGCCGCGCT GTCGGCCGCA
GCACTGGCGG CATTGGTGGC AGCGGTGGCG GTGCCGTTTT TCCCGACCAC TTTCCTGCCG
CCATTTAACG AGGGCACGCT GCTGGTCGGC CTGCGCTTGA ACCCGGGCGT GACCCTGGCC
GAGACCACCT TACTGGCGCG CCAGGCCGAG GTGTTGGTCA AGCAAGTGCC CGAGGTCACG
CACGTCGGGC GGCGCAGTGG TCGCGCCGAG TTGGACGAGC ATGCAGAAGG GGTTCACGTC
AGCGAACTGG ACGTGGGTTT GAAGCCCTCC GGGGAAATCC TGCGTTCGAT GGATGAAGTG
TCGGCCGACA TCCGCTCGCG TCTGGTCAAC CTCCCAGCGG CCGTGTCCAT TGGGCAGCCG
ATTTCGCACC GCATCGACCA CATGCTGTCG GGTGTGCGCG CGCAGATCGC AATCAAGATT
TTCGGCGAAG ACCTGGACAC CCTTCGCGGT CAGGCCGAAG TGTTGCGCGC CGGGCTGGCC
ACGGTCCCCG GCTTGGCCGA TCTCGATATT GAAAAGCAGG TGCTGGCACC GCAGATCAAG
GTGCGCATTG ACTATGCCGC GGCGGCTCGC TACGGCGTGC CGGCCCCGCA AATACTGAGC
ACGCTGCAAA ACCTGGTGGA AGGCGAGAAG ATTGCCCAGA TCGTTGAAGG CAGCCGGCGC
TTCGCGCTCG TCGTACGGCT GCCGGAGTCG GCGCGCTCGG TGGAAGGGTT GGGGCGGATC
ATGATCGAGA CACCGAACGG ACGAATTCCT CTGTCCAAAG TGGCGAGCAT CGAAGACAGC
GACGGCCCGA ATCAGATTAG CCGTGACGAC GGCAAGCGCC GCATCGTGCT GTCGGCCAAT
GCGCAGGGGC GGGCTCTGTC GGATGTCATC GCAGACGTGC GCCGCGTCGT GGCTCAGACC
AAGCTGCCCG AGGGGTACTT CGTCACCTTG GGCGGCCAGT TCCAGGCGCA GGAGGAGGCG
TCACGGCTGG TAGGGCTGCT GTCGATTGTT TCGGCGGTGC TGATGTTCGT GGTGCTTTAC
AGCCGCTACC AGTCGACCCG ACTGGCGCTG CTGATCATGG CAAACATTCC CCTGGCGCTG
GTAGGTGCGG TGTTCGGGTT GTGGCTCTCC GGTCAACCGC TGTCGGTGGC GGCTTTGGTA
GGTTTTATCA CACTGGCCGG TATATCAGTG CGCAATGGCA TCTTGAAGGT TAGCCACTAC
ATCAACCTGA TGCGATTTGA GGGTGAGAAC TTCGATCACA AGATGATCGT GCGCGGCTCG
CTTGAGCGTC TGAGTCCGGT GCTGATGACC GCGCTGGTGA CGGCGTTTGC GCTGGCACCT
CTGCTGTTTG AGGCCGAGCG GCCCGGCACT GAAATCCTGC ATCCGGTGGC GGTGGTGATC
TTCTCGGGCC TGATCAGCTC AACGCTGCTT GACACCTTTC TCACTCCGGT GATGTTCTGG
CTGTTCGGAC GCAAAGACGC TGAGCGACTG CTTGACGACA AGAACGCCGG CGCTTTCTGA
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| Protein sequence | MFKWLLDNSL ANRLLVIIAA LVLMGYGAFT LSRTPVDVFP DLNKPTVTVI TEAGGMAAEE
VEQLITFPLE TAMNGLPGVE TVRSASSAGL SFLYVTFNWN TEIFRARQMV GERLSSMEEG
LPEGTVPNMG PISSIMGEIM QIAIPIDTAK ISQMAVREYA DWVLRPRLLA IAGVAQVVPI
GGEVRQFQVQ PNTVRMSELG ITHEQLEGAL KGYSSNTSGG FLELNGREYL IRNLGRTSSL
DDLRNLALTA RDGQPILMRQ IADVTFAAAI KRGDAGFEGK PAVILSIQKQ PAADTIALTR
AIETALTEMQ RSLPAGMDKP TVTFRQASFI ESSITTLQGK LIAASGFVAV ILFLFLGNVR
TTVIALVAIP VSILITALVF RYFGMSINTM TLGGLAIAIG GLVDDAVVDI ENVMRRLKED
RIKHPEHRLH PIEIVKSATM EVRSAILYAT VIIVLVFVPL FALPGMEGRL FVPLGISFIV
STLASLVVSM TVTPVLNFYL LPRMKSLDHG DTRLLAWLKA RYRIGLQSVL ARPKAALSAA
ALAALVAAVA VPFFPTTFLP PFNEGTLLVG LRLNPGVTLA ETTLLARQAE VLVKQVPEVT
HVGRRSGRAE LDEHAEGVHV SELDVGLKPS GEILRSMDEV SADIRSRLVN LPAAVSIGQP
ISHRIDHMLS GVRAQIAIKI FGEDLDTLRG QAEVLRAGLA TVPGLADLDI EKQVLAPQIK
VRIDYAAAAR YGVPAPQILS TLQNLVEGEK IAQIVEGSRR FALVVRLPES ARSVEGLGRI
MIETPNGRIP LSKVASIEDS DGPNQISRDD GKRRIVLSAN AQGRALSDVI ADVRRVVAQT
KLPEGYFVTL GGQFQAQEEA SRLVGLLSIV SAVLMFVVLY SRYQSTRLAL LIMANIPLAL
VGAVFGLWLS GQPLSVAALV GFITLAGISV RNGILKVSHY INLMRFEGEN FDHKMIVRGS
LERLSPVLMT ALVTAFALAP LLFEAERPGT EILHPVAVVI FSGLISSTLL DTFLTPVMFW
LFGRKDAERL LDDKNAGAF
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