| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4564 |
|---|
| Symbol | |
|---|
| ID | 4685535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008758 |
|---|
| Strand | - |
|---|
| Start bp | 127625 |
|---|
| End bp | 128887 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639826412 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_973577 |
|---|
| Protein GI | 121583136 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAATA CCATTGCCTT GCTGATCGAT CACTGGAAAG CCGACCCACG CAGTACGTTT
AACACCTGGT TTCTCTGGGC TGAGCGACTC AAGAACTTTC GTTCCATTCG CCGCGGTATT
GGCCAAGTGG TGCGCGATAT TGATGCGGGC ACTTTCGGTA ACGTCTACCG CGGCTCCACT
CTGCAGACCG TAGTGGGATC AGTAGCCGAG CAACGTCAGA TTTTCAAAGG CGCAGACCAT
GCTTTTTTGT GGAAACCCAA ACTGCGCATA CCCGATATTT ATGAAAATGC CGGGAACCAA
CGCGCTTTTG CCAGGTTGCT TAATGCCTGC GACTGCTGTG ATACCGCGCA AGCAGTAATT
GAAGCAATTC GAAAGATCGA TGCGCTCAAG ATCAAAGGTT TGGGCCCGGC CGTAGCCAAC
TTGCTTTACT TCATTCACCC GACGTTGGTG TGTCCTTTCA ACACGGCCAT CGTCAACGGA
TTCAACGCTG TCACCGGGAG TAATGTCAAA CTGGGACGCT GGGACCACTA CCTCACCATG
CGTGAAGGAC TGATCAGACT CAACGAGCAA CACCGCCATA AGCTCTCAAA TGACCTGGGC
GCCATTGCCG GCCTGATGTT CGATGTCGGA AGCGGCCGCT ACGCCGCACC ACCCCGCCTG
CAAGAGCCTG CAGTAGTCGC TTTGTGGGAA ACGGACTTGC AACGCATACG CGAAGAGTCA
GCCGCTGCTC AAAAGCAATG GTTGCTGGCC AACGAGAGCG ATGCGACGCA CACCCAGATT
CAAGGATGGT TACGCGATAT GGGTATGTCG CTCGGTTTTG ACGTCTGGAT CGCTTCTAAC
GACCGGAGCC GAGCGTATGC CAATGGGTTT CTCGCTGACG GATGCCTACA GCGCTGGCCA
GACGCCACAG CGCAGGGTCT GGATTCTGTC CGCCTGATTG ACGTGGTCTG GCTGATACGC
GACAGCGCTC AGGTCGCAGC AGCGTTCGAG GTGGAGCACT CAACGTCCAT CTATTCTGGC
ATCGTACGGA TGCTGGACCT TGCCCTGGGT ACGCAAGTGG GCGCTGCAAG CACCTTGTTT
CTTGTGGCGC CAGACAATCG GCGCGAGGAA GTGGCACATC AACTCAAGCG TCCCGCGTTT
TCCAGGGTGT CGGAGTTGGG TATACGCTAT TTGTCCTACA GCCAACTCAA AGAGCACCGA
GAGGCAATCG GCCGTTTCGG CTCAAGCCTC AAGCCAGTGC TGGAAATATC CCAGTTGTTG
TGA
|
|---|
| Protein sequence | MSNTIALLID HWKADPRSTF NTWFLWAERL KNFRSIRRGI GQVVRDIDAG TFGNVYRGST
LQTVVGSVAE QRQIFKGADH AFLWKPKLRI PDIYENAGNQ RAFARLLNAC DCCDTAQAVI
EAIRKIDALK IKGLGPAVAN LLYFIHPTLV CPFNTAIVNG FNAVTGSNVK LGRWDHYLTM
REGLIRLNEQ HRHKLSNDLG AIAGLMFDVG SGRYAAPPRL QEPAVVALWE TDLQRIREES
AAAQKQWLLA NESDATHTQI QGWLRDMGMS LGFDVWIASN DRSRAYANGF LADGCLQRWP
DATAQGLDSV RLIDVVWLIR DSAQVAAAFE VEHSTSIYSG IVRMLDLALG TQVGAASTLF
LVAPDNRREE VAHQLKRPAF SRVSELGIRY LSYSQLKEHR EAIGRFGSSL KPVLEISQLL
|
|---|
| |