Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4558 |
Symbol | |
ID | 4685546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008758 |
Strand | - |
Start bp | 123608 |
End bp | 124288 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639826407 |
Product | two component heavy metal response transcriptional regulator |
Protein accession | YP_973572 |
Protein GI | 121583131 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGATTT TGGTAATTGA AGACGAGCCC AGAGCGGCCG ATTATTTGCG CCAGGGCTTG ATGGAAAGCG GCTACGCCGT GGAGGTTGCC CACAACGGAA CGGACGGTTT GCACGCGGCG GTCAATGGCG ATCATGGATT GGTGATTCTG GACATCATGC TGCCCGGCAT TGACGGATTT GCCGTGCTGT CGGCGCTGCG TACCTCCCGG CAAATACCCG TTTTGATGCT CACCGCCCGG GGCAATACCG ACGACAAGGT GCGCGGGTTT GATCTGGGCG CGGATGATTA CCTGCTCAAG CCTTTTCAGT TTCCTGAACT GTTGGCCAGG GTGCGCGCCC TGCTCAAACG CGGCCAGCCG GTCGTAAAGG ACCCCGTTTT ACGGGCTGCC GATCTTGAAA TTGATCCGGT GCGTCACCGG GCCACGCGCG CCGGCCAGCG GATCGACCTG TCTGCCAAAG AGTTTGCCTT GCTGACCCTG CTCGCCCAGA GGGCGGGCGA AGTGCTTTCC AGAACCCAGA TCGCGTCGCT GGTGTGGGAC ATCCATTTCG ATTCGGACAC CAATGTGGTC GAAGTGGCGA TCCGGCGGCT GCGCGCCAAG ATCGACGATC CTTTTGACGA CAAACTGATC CACACGGTGC GCGGCGTGGG TTACGTACTG GAACGCCGGG CGTCGGTGTG A
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Protein sequence | MKILVIEDEP RAADYLRQGL MESGYAVEVA HNGTDGLHAA VNGDHGLVIL DIMLPGIDGF AVLSALRTSR QIPVLMLTAR GNTDDKVRGF DLGADDYLLK PFQFPELLAR VRALLKRGQP VVKDPVLRAA DLEIDPVRHR ATRAGQRIDL SAKEFALLTL LAQRAGEVLS RTQIASLVWD IHFDSDTNVV EVAIRRLRAK IDDPFDDKLI HTVRGVGYVL ERRASV
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