| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4513 |
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| Symbol | |
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| ID | 4685580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008758 |
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| Strand | + |
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| Start bp | 83337 |
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| End bp | 86504 |
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| Gene Length | 3168 bp |
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| Protein Length | 1055 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639826363 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_973528 |
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| Protein GI | 121583087 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGCCC GATTTATTCG CTGGTCCATT GTCAATCGCT TTTTGGTCCT CTTGGCAACC
CTGATGCTGG GAGCCTGGGG GGTGTATTCG GTGCTCAGGA CACCGTTGGA CGCCTTGCCC
GACCTGTCGG ATGTGCAGGT CATCATTCGC ACTTCCTACC CAGGACAAGC GCCGCGCATT
GTTGAAAATC AGGTCACCTA CCCGCTGACC ACGACCATGC TGTCAGTGCC GGGCGCCAAG
ACGGTGCGCG GCTACTCCTT TTTCGGCGAC TCTTTCGTTT ACGTTCTGTT CGAAGACGGA
ACGGATCTCT ACTGGGCGCG CTCGCGGGTG CTGGAGTACC TCAACCAGGT CCAGTCGCGT
CTGCCTGCGC AGGCCAAGGC CTCGCTCGGC CCGGACGCAA CCGGCGTGGG CTGGATTTAC
CAGTATGCGC TGGTAGACCG CAGCGGCACG CAGGACCTGG GGCAGCTTCG GGCGCTGCAG
GACTGGTTTC TCAAGTACGA ATTGAAGACG GTGCCCAATG TCGCCGAGGT GGCTTCGATC
GGCGGCATGG TGCGGCAGTA CCAGATCGTG CTCGACCCAC AGAAACTGGC TGCTTACGCC
ATCCCGCACA CCAAGGTGGC CGAAGCCGTC CAAAAGGCCA ACCAGGAAGC CGGTGGCTCG
GTCCTTGAGC TGGGGGAGGC CGAGTACATG GTGCGGGCGA CGGGTTACCT CAAGGGCCTG
GAGGACTTTC GCGCCATTCC CTTGACCACG ACGGCGGGCG GCGTGTCCGT GCGCCTGGGG
GACGTGGCGC GCATCCAGAT CGGTCCGGAA ATGCGCCGCG GCATTGGCGA GCTCGATGGC
GAAGGTGAAG CGGTCGGCGG CGTGATCATC ATGCGCTCGG GCAAAAATGC GCTGGAAACC
ATCGCGGCCG TCAAGGCCAA AATGGCGCAG CTCCAAGCGA GCTTGCCCCA AGGCGTTGAA
GTCGTGACCA CCTATGACCG CTCTGGCCTG ATCAACCGCG CGGTGGACAA CCTCACGTAC
AAGCTGCTGG AAGAATTCCT GGTGGTGGCG GTGGTGTGCT TTGTGTTTCT CTTTCACCTG
CGTTCGGCCT TGGTGGCCAT CATTTCGCTG CCGCTGGGCA TTTTGGCCGC TTTCATCGTG
ATGCATTACC AAGGGGTAAA CGCGAACATC ATGTCCCTGG GCGGGATCGC AATCGCCATT
GGCGCCATGG TCGATGCGGC CGTGGTCATG ATCGAAAATG CGCACAAGCA CCTGGAGCAT
TGGGCCCACG CCCACCCCGG GGAAAAGCTC GAGGGCGAAA CGCGATGGCA GGTCATTGGC
GACGCAGCAG CGGAAGTAGG GCCTGCGCTG TTCTTCTCGC TCTTGATCAT CACACTGTCG
TTTATTCCCG TGTTCACGCT CCAAGCCCAG GAAGGCCGGC TGTTTGCCCC GCTGGCGTTT
ACCAAGACGT ATGCCATGGC AGCGGCTGCC GGTCTATCGG TGACCTTGAT TCCAGTGCTG
ATGGGGTATC TGATCCGGGG CCGAATTCCG GACGAAAAAA GCAACCCCCT CAACCGATTT
TTGATTGCGG TCTACCGCCC GCTGCTCAAT ATCGTGTTGC GCGCGCCAAA AATGACCCTG
GTGGTGGCCG GCATTGTTTT GGCGACTAGC TTGTGGCCGC TGCAGCACAT TGGGGGCGAG
TTCATGCCGC GCCTGGACGA GGGTGACCTG TTGTACATGC CGTCGGCACT TCCCGGACTG
TCTTCCGGCA AGGCGGGCGA GTTGCTGCAA CAAACCGACC GGCTCATCAA GACCGTGCCC
GAGGTCGCCA GTGTTTATGG CAAGGCTGGG CGCGCCGAAA CCGCCACCGA TCCGGCACCC
ATGGAAATGT TCGAGACGAC GATCCAGTTC AAGCCAAAAG ACCAATGGCG CGCTGGCATG
ACCCAGGACC AACTGGTCGA AGAACTCGAC CGCATCGTCC AAGTGCCTGG CCTCTCCAAT
ATCTGGGTGC CGCCGATCCG CAACCGCATC GACATGCTGG CCACCGGCAT CAAGAGCCCG
GTGGGCGTCA AGGTCGCTGG CACGGACCTG CAAACCATTG ACAAACTCTC TAGCGAGATC
GAACGCGCCT TGAAAGACGT GCCGGGCGTG AGCAGCGCGC TGGCTGAAAG GCTCACCGGC
GGGCGTTATG TGGACGTCAA CATCAAGCGC GATGCCGCCG CCAGCTTCGG CTTGAACATT
GCCGATGTCC AGTCGGTGAT CAGCTCGGCC GTTGGCGGCG AGAACATCGG TGAGACGGTC
GAAGGCCTGC AGCGTTTCCC CATCAACATG CGCTACCCCC GTGAGCTTCG CGATTCCATG
GAAACGCTGC GCAGCTTGCC TTTCGTCACA GAGCGTGGCC AGCGTGTGGT GCTGTCCGAC
GTGGCCGACA TTCGCATCAC CGACGGGCCA CCCATGCTGC GCAGCGAAAA CGCGCGCCTC
TCGGGATGGG TCTACGTGGA CATTCGCGAT CGCGATCTGC GCTCTGCGGT GCAGGACATG
CAAAAAGCCG TGACTGAAAA GGTCAAGCTT CCGCCGGGGT ATTCCATCTC CTGGTCGGGC
CAGTTTGAAT TTCTGGAGCG GGCAACTGCC AAAATGAAAA TCGTGGTGCC GTTCACGTTG
ATGATCATTT TTGTGCTGCT GTACCTGACG TTCAAGCGTT TTGACGAGGC AGTGTTGATC
ATGGCAACGC TGCCGTTTGC ACTGGTGGGC GGCATCTGGC TGCTGTACCT GCTGAGCTAC
AACCTGTCGG TCGCAGGCGC TGTCGGGTTC ATTGCATTGG CCGGTGTTTC TGCGGAGTTC
GGGGTGATCA TGCTGCTGTA CCTGCGCCAT GCCTGGGATG AGCGCCTTGC GCAAGGCAAG
ACCAATGCTG AAGATCTGCT CGATGCCATC CGGGAGGGCG CGGTCTTGCG TGTACGGCCC
AAGGCCATGA CGGTGGCCGT TATTTTGGCC GGCCTGTTGC CGATCATGTG GGGCACCGGC
ACGGGCTCCG AGGTCATGCA GCGCATTGCC GCGCCCATGG TGGGTGGCAT GATCACTGCT
CCGCTGCTGT CAATGTTCGT CATTCCAGCG GTGTACCTGT TGATGCGCAG GCCGCGAGAA
ACTCAGCGGA CATCGGGCCG CTTCTGGAGG CGCCGTGCAG TGGTTTAG
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| Protein sequence | MIARFIRWSI VNRFLVLLAT LMLGAWGVYS VLRTPLDALP DLSDVQVIIR TSYPGQAPRI
VENQVTYPLT TTMLSVPGAK TVRGYSFFGD SFVYVLFEDG TDLYWARSRV LEYLNQVQSR
LPAQAKASLG PDATGVGWIY QYALVDRSGT QDLGQLRALQ DWFLKYELKT VPNVAEVASI
GGMVRQYQIV LDPQKLAAYA IPHTKVAEAV QKANQEAGGS VLELGEAEYM VRATGYLKGL
EDFRAIPLTT TAGGVSVRLG DVARIQIGPE MRRGIGELDG EGEAVGGVII MRSGKNALET
IAAVKAKMAQ LQASLPQGVE VVTTYDRSGL INRAVDNLTY KLLEEFLVVA VVCFVFLFHL
RSALVAIISL PLGILAAFIV MHYQGVNANI MSLGGIAIAI GAMVDAAVVM IENAHKHLEH
WAHAHPGEKL EGETRWQVIG DAAAEVGPAL FFSLLIITLS FIPVFTLQAQ EGRLFAPLAF
TKTYAMAAAA GLSVTLIPVL MGYLIRGRIP DEKSNPLNRF LIAVYRPLLN IVLRAPKMTL
VVAGIVLATS LWPLQHIGGE FMPRLDEGDL LYMPSALPGL SSGKAGELLQ QTDRLIKTVP
EVASVYGKAG RAETATDPAP MEMFETTIQF KPKDQWRAGM TQDQLVEELD RIVQVPGLSN
IWVPPIRNRI DMLATGIKSP VGVKVAGTDL QTIDKLSSEI ERALKDVPGV SSALAERLTG
GRYVDVNIKR DAAASFGLNI ADVQSVISSA VGGENIGETV EGLQRFPINM RYPRELRDSM
ETLRSLPFVT ERGQRVVLSD VADIRITDGP PMLRSENARL SGWVYVDIRD RDLRSAVQDM
QKAVTEKVKL PPGYSISWSG QFEFLERATA KMKIVVPFTL MIIFVLLYLT FKRFDEAVLI
MATLPFALVG GIWLLYLLSY NLSVAGAVGF IALAGVSAEF GVIMLLYLRH AWDERLAQGK
TNAEDLLDAI REGAVLRVRP KAMTVAVILA GLLPIMWGTG TGSEVMQRIA APMVGGMITA
PLLSMFVIPA VYLLMRRPRE TQRTSGRFWR RRAVV
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