Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4309 |
Symbol | |
ID | 4685371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008757 |
Strand | + |
Start bp | 218164 |
End bp | 218451 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639826168 |
Product | putative transcriptional regulator |
Protein accession | YP_973333 |
Protein GI | 121582891 |
COG category | [K] Transcription |
COG ID | [COG2944] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00238443 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.19282 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATCAA CCATCGAGTT AAGCGCGTAT GGTCTTGTAT CAAAAACGGA TATGGCCCGA ATGAAGGCGC TGTGCGAAGT GCCGCCTGAG TATCCACCGG AGCGCGTCGT GTCTATTCGA ACTGAAATAG CAAAAATGAG TCAAGCCGTT TTTGCCTCGT TACTCAATTT GAGTGTTTCT ACAGTTCAAA AGTGGGAGTC TCCTGTGGCG AATCAGCGCC CAAGTGGAAG CTCTGCAAAA TTACTTCATG TGCTAGAAAA GAAGGGAATC GAGGGACTAC TCATTTAG
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Protein sequence | MESTIELSAY GLVSKTDMAR MKALCEVPPE YPPERVVSIR TEIAKMSQAV FASLLNLSVS TVQKWESPVA NQRPSGSSAK LLHVLEKKGI EGLLI
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