Gene Pnap_4309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4309 
Symbol 
ID4685371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008757 
Strand
Start bp218164 
End bp218451 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content47% 
IMG OID639826168 
Productputative transcriptional regulator 
Protein accessionYP_973333 
Protein GI121582891 
COG category[K] Transcription 
COG ID[COG2944] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00238443 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.19282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCAA CCATCGAGTT AAGCGCGTAT GGTCTTGTAT CAAAAACGGA TATGGCCCGA 
ATGAAGGCGC TGTGCGAAGT GCCGCCTGAG TATCCACCGG AGCGCGTCGT GTCTATTCGA
ACTGAAATAG CAAAAATGAG TCAAGCCGTT TTTGCCTCGT TACTCAATTT GAGTGTTTCT
ACAGTTCAAA AGTGGGAGTC TCCTGTGGCG AATCAGCGCC CAAGTGGAAG CTCTGCAAAA
TTACTTCATG TGCTAGAAAA GAAGGGAATC GAGGGACTAC TCATTTAG
 
Protein sequence
MESTIELSAY GLVSKTDMAR MKALCEVPPE YPPERVVSIR TEIAKMSQAV FASLLNLSVS 
TVQKWESPVA NQRPSGSSAK LLHVLEKKGI EGLLI