Gene Pnap_4308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4308 
Symbol 
ID4685308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008757 
Strand
Start bp217746 
End bp218144 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content42% 
IMG OID639826167 
Producthypothetical protein 
Protein accessionYP_973332 
Protein GI121582890 
COG category[S] Function unknown 
COG ID[COG4737] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00337964 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.132689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTCTA AGAAAGTATT TAAAACGAAG TCATTTGCCA GATGGGCTAG GAAGTTGATA 
AGTGATTCAG AACTTTGCGT TGCTGCTCTT GAAATTGAAA AGAATCTTTA CGAAGCAGAC
TTGGGCGGTG GTGTTTGCAA GAAGCGCATC GCAGTTCCAG GGCATGGCAA AAGTGGTTCC
ACTCGTACAC TTGTTGCCAA GCGTCATGAA AATGCAATAT TTTTTATTGT TGGGAGGTCC
AAAAGTGACC CTGGAGCTGA TTTTTCACCT ACGGAAGAAA CTGTAGCTAA AGCATATGCG
GGCCTGCTAC AAAAAGCGAG CTTATCAAAA TTGAATCAAA TGAAGGTGAA TGGAGCCTTA
GTGGAGATAT GCGATGACAA AGAAAACTGC AAGCGATAG
 
Protein sequence
MHSKKVFKTK SFARWARKLI SDSELCVAAL EIEKNLYEAD LGGGVCKKRI AVPGHGKSGS 
TRTLVAKRHE NAIFFIVGRS KSDPGADFSP TEETVAKAYA GLLQKASLSK LNQMKVNGAL
VEICDDKENC KR