| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4243 |
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| Symbol | |
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| ID | 4685344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | + |
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| Start bp | 116229 |
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| End bp | 116765 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639826103 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_973268 |
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| Protein GI | 121582826 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.547585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAAT TACTGAAAAA AGAGCCGAAA CAGAGCGAGG GAACACATCT CCTGCACCGT
GTGGTTCGGT CCCCGCATAC CCGTTTTTTT GCTCTGCTGG GCCTGTTCCT TGTCTGGCAG
CCATCGGCAA ATGCCTTTTG CTTTGCCGAG GCCAGCGCAC GCTATACAGT CAACGAGTAC
ATCCTGAGGG CCATCGCGCT ACATGAGTCG CGGATGAATC CGTCGTTGCA GCTCGTCAAT
AGCAACGGTT CCGTGGACAT TGGACTCATG GGCATCAATA CCGTGCATAT CAGCCCGGGC
GAGCGTCTGT ACCGGGCGGG CATGACGGGC TCAATGCTCC TGGACCCCTG CACCAACGTC
ATGACAGGTG CATACCTGTT GCGTCTCAAG ATGAACCGAT TTGGCAACAC CTGGACGGCT
GTTGGCGCCT ACCATTCCAT CACTGACCAG TACAACGTCG CTTACCAAGG CCGTATCCGC
GCTTCACTCG ATAAGGTTAT GCGGCAGGCT CAAGCTGCTG TAAGAGTGGA CAACTAA
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| Protein sequence | MFKLLKKEPK QSEGTHLLHR VVRSPHTRFF ALLGLFLVWQ PSANAFCFAE ASARYTVNEY
ILRAIALHES RMNPSLQLVN SNGSVDIGLM GINTVHISPG ERLYRAGMTG SMLLDPCTNV
MTGAYLLRLK MNRFGNTWTA VGAYHSITDQ YNVAYQGRIR ASLDKVMRQA QAAVRVDN
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