| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4220 |
|---|
| Symbol | |
|---|
| ID | 4685261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008757 |
|---|
| Strand | + |
|---|
| Start bp | 93235 |
|---|
| End bp | 93642 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639826080 |
|---|
| Product | histone family protein nucleoid-structuring protein H-NS |
|---|
| Protein accession | YP_973245 |
|---|
| Protein GI | 121582803 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2916] DNA-binding protein H-NS |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATC CAATAGATGA AGTCGTCAAG CTCAATCAAC AAATTGCAGA GTTGCAAAAA
AAGTCCGAGG AACTGAAAAA AAAGAATCGG CCGGTGGTTG TTGCTGAGTT GCGCGAACGC
ATGGCAGCTT ACGGCATCAC TGCCCAAGAA CTGACGCGTC CAGTTCCAAA GGCGCGAATG
CTGAAGGAAG ATTTTGCGAC ACCCATCAAA GCTGTCAAGG GCAAGATCAA ATCTTCGCCA
CTGCCAGCCA AGTTCCGCAG CCCCGATGGC AAGAATGAGT GGAGCGGTCG CGGAATGGCA
CCGAAGTGGA TGAACACCCT GATTGAACAA GGCCACAGCC GGGACGAGTT CCTGATTTCA
AAAGACGCGC CAGCACAAGA TAAGGCAGCG GAATCCGCTA AAGCCTAA
|
|---|
| Protein sequence | MENPIDEVVK LNQQIAELQK KSEELKKKNR PVVVAELRER MAAYGITAQE LTRPVPKARM
LKEDFATPIK AVKGKIKSSP LPAKFRSPDG KNEWSGRGMA PKWMNTLIEQ GHSRDEFLIS
KDAPAQDKAA ESAKA
|
|---|
| |