| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4195 |
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| Symbol | |
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| ID | 4685223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | + |
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| Start bp | 72156 |
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| End bp | 73187 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639826055 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_973220 |
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| Protein GI | 121582778 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG TCCTGAAAGA CCAGCCGCCA TCATCCGCTG CCACATCACT GGATCGGCGT
ATCCGCATGT TGCGTACGGC GATGGGACCG CTGATCGCTG CCGCGCTGGA AGATCCGGAC
GTGGTGGAGA TCATGCTCAA CCCGGATGGC TCCTTGTGGA TTGATCGGCT GTCGTCGGGC
CGCTCGCCGA TGGGCGTCAA GCTGTCCGAG GCCGATGGCG AACGCATCAT CCGGCTGGTT
GCCGCCCATG TCGGCACCGA GGTGCATCGC GGCCAGCCGT TGCTGACGGC CGAACTGCCG
GAAACGGGTG AGCGCTTCGA GGGCATCTTG CCACCCGCTG CGCCGGGGCC GGCCTTTGCC
TTGCGTAAGC GCGCCGTGAG CATCATTGGG CTGGAGCGCT ATGTCGCCGA CAGCATCCTG
TCCGAGGAAC AAGCCGAGTT CCTGCGCCGC GCGGTCCGCG AGCGGCTAAA CATCCTGATC
GCTGGGGGTA CCAGCACTGG CAAGACCACG CTGGCCAACG CGCTGTTGGC CGAGATTGCC
GCCACTGGCG ACCGGGTGCT GGTGCTCGAA GACACCGTGG AGCTGCAGTG TGCCGCCCGC
GACCACGTAT CGCTGCGCAC CCGCGCTGGC GTGGTGTCGA TGGCGGAGCT GGTGCGGGCC
ACGATGCGGC TGCGGCCCGA CCGCGTGATC GTCGGCGAGG TGCGCGGCGG TGAGGCACTG
GACCTCATCA AGGTCTGGGG CACCGGGCAC CCCGGCGGCA TCGCCACGAT CCACGCCAGT
TCCGCTCACG GCGCGCTACT GCGCTTGGAA CAACTGATCC TCGAAGTCGC TTTGACACCG
CCGCGTGCGC TGATCGCCGA GGCGGTGAAT GTCATTGTTT TCATCGCCGG GCGCGGCCGT
GGCCGCCATG TGCAGACCAT CGCCCGCGTT GTCGGTTTCG ACGTCCACGG CTACCAGCTC
GACGACGCGC TCGCGCCGCC GCTTCCAACT CTTTCGCTTC CTTCCTCAAC CACCCCTGGA
GAACTGCCAT GA
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| Protein sequence | MSAVLKDQPP SSAATSLDRR IRMLRTAMGP LIAAALEDPD VVEIMLNPDG SLWIDRLSSG
RSPMGVKLSE ADGERIIRLV AAHVGTEVHR GQPLLTAELP ETGERFEGIL PPAAPGPAFA
LRKRAVSIIG LERYVADSIL SEEQAEFLRR AVRERLNILI AGGTSTGKTT LANALLAEIA
ATGDRVLVLE DTVELQCAAR DHVSLRTRAG VVSMAELVRA TMRLRPDRVI VGEVRGGEAL
DLIKVWGTGH PGGIATIHAS SAHGALLRLE QLILEVALTP PRALIAEAVN VIVFIAGRGR
GRHVQTIARV VGFDVHGYQL DDALAPPLPT LSLPSSTTPG ELP
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