| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4193 |
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| Symbol | |
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| ID | 4685226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | + |
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| Start bp | 69719 |
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| End bp | 71710 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639826053 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | YP_973218 |
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| Protein GI | 121582776 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGGGA CCAGTGTGCT GTTCGGTCAG GTGTTGACGG TGTTCGGCAT CGTCTTAGCC
GGCGTGTGGG GTGCCACACA ATGGACCGCC GCTGCCCTGG GTTACCAGCT ACGCCTTGGC
ACTCCCTGGT TCGATTTCTT CGGTACGCCG GTCTATCACC CTTGGCGTTT GTTCGAGTGG
TGGTTCTTCT TCGACGCTTA CGCACCGCAT ATCTTCAACA CGGGTGGCAG CATCGCTGGC
GCCAGCGGCA TGGTCTCGGT GGTGGTCGCC ATCGGCATGT CGATCTGGCG CTCGCGGCAG
TCCAAGCTGG TCACAACTTA CGGGTCCGCA CGCTGGGCCG ATGCCAAAGA AATCCGCAAG
GCGGGATTGA CCAATCCAGC CGGTGTTTTC CTCGGCCTGC ATGACGATCA GTACCTGCGC
CATGAAGGGC CGGAACATGT CCTGACCTTC GCGCCCACAC GCTCGGGCAA AGGCGTGGGT
CTGGTGGTGC CGACGCTGTT GTCATGGCCT GCATCTGCCG TTATCCACGA CATCAAGGGC
GAGAACTGGA ACATCACCGC TGGCTGGCGC TCACGCTTCT CGCACTGCCT GCTGTTTAAC
CCGACCGATC CGAAGTCGGC TGCATACAAC CCACTACTGG AAGTCCGACG CGGCGCGCAT
GAAGTGCGCG ACGTGCAGAA CATCGCCGAC ATCCTGGTCG ATCCCGAAGG GGCACTGGAA
CGGCGCAACC ACTGGGAGAA GACTTCGCAC GCTCTGCTGG TCGGCGCGAT CTTGCATGTG
CTCTATGCGG GCGAAGACAA GACGCTGCGC GGCGTCGCCA ACTTCCTGTC AGATCCGGCG
TGCCCGTTCG AGGTGACGTT GCACCGGATG ATGAGCACGC GGCACTTGGG CGAGAGCACC
CATCCTGTTG TCGCATCCGC CGCACGCGAA GTTCTCAACA AGTCGGACAA CGAGCGCTCG
GGCGTGCTGT CCACGGCCAT GAGTTTTCTG GGATTGTATC GCGACCCCAC CGTGGCCGAA
GTGACTTCGC GTTGCGACTG GCGCATCGCC GACCTGATCT CTGCCGAGCA TCCAGTGTCG
TTGTACCTGG TGGTGCCGCC TTCAGACATC AGTCGCACCA AGCCGCTGAT CCGGCTGATC
CTGAACCAGA TTGGTCGGCG GCTCACCGAA TCGCTCGATG GTTCCGATGG TGTGGAGCGC
AAGCACAAGC TGCTGCTGAT GCTCGATGAG TTCCCGGCAT TGGGCCGGCT GGACTTCTTT
GAATCGGCAC TGGCATTCAT GGCTGGCTAC GGCCTGCGCG CCTTCCTGAT TTCACAGTCG
CTCAACCAGA TCGACAAAGC CTACGGCCAG AACCATTCGA TTCTGGACAA CTGCCATGTG
CGCGTGACCT TCGCCACCAA CGACGAACGC ACTGCGAAAC GCATCTCCGA AACGCTGGGC
ACGGCCACCG AGCTGCGCGC GCAGCGCAAC TACGCCGGCC ATCGGCTGGC GCCGTGGCTG
GGCCACCTGA TGGTGTCACG CCAGGAGACC GCGCGGCCAC TGTTGACGCC TGGCGAAGTC
ATGCAACTGC CGCCCGATGA ATCGGTGGTG ATGGTCTCCG GCCATGCCCC GATCAAGGCC
AAGAAGCTGC GCTACTACCT TGACGCCAAC TTCAAGCGAC GCGTACTCCC GCCGCCCGCG
CTGACATTGG GCCGTTATGC CGACGTGCCA GCGGCACGCG CCGACGACTG GAGCGCCTTG
GCTGTGCCTA CGGTGTCGGC CGCTTCGGCG ACGGCTGGGC TTGGCGAATC GCTCGATGAC
GGCGGCCCGC GTCAGCAGCC CGAGCTATCC GAAGTCGCCA CCTACAGCCC CGAACCCGAT
CAGTCGGCCA GCGACCTGTC GCTGCTTGAT GACGACGACT TTCCGCTTCC CCTCCCAAAC
CAGCTCGACC CGCGCTTGCA GCGCACGGCA CGGCTGGCCG CTCTCGACCC TGACGACGGA
ATCCAGCTAT GA
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| Protein sequence | MQGTSVLFGQ VLTVFGIVLA GVWGATQWTA AALGYQLRLG TPWFDFFGTP VYHPWRLFEW
WFFFDAYAPH IFNTGGSIAG ASGMVSVVVA IGMSIWRSRQ SKLVTTYGSA RWADAKEIRK
AGLTNPAGVF LGLHDDQYLR HEGPEHVLTF APTRSGKGVG LVVPTLLSWP ASAVIHDIKG
ENWNITAGWR SRFSHCLLFN PTDPKSAAYN PLLEVRRGAH EVRDVQNIAD ILVDPEGALE
RRNHWEKTSH ALLVGAILHV LYAGEDKTLR GVANFLSDPA CPFEVTLHRM MSTRHLGEST
HPVVASAARE VLNKSDNERS GVLSTAMSFL GLYRDPTVAE VTSRCDWRIA DLISAEHPVS
LYLVVPPSDI SRTKPLIRLI LNQIGRRLTE SLDGSDGVER KHKLLLMLDE FPALGRLDFF
ESALAFMAGY GLRAFLISQS LNQIDKAYGQ NHSILDNCHV RVTFATNDER TAKRISETLG
TATELRAQRN YAGHRLAPWL GHLMVSRQET ARPLLTPGEV MQLPPDESVV MVSGHAPIKA
KKLRYYLDAN FKRRVLPPPA LTLGRYADVP AARADDWSAL AVPTVSAASA TAGLGESLDD
GGPRQQPELS EVATYSPEPD QSASDLSLLD DDDFPLPLPN QLDPRLQRTA RLAALDPDDG
IQL
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