| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4182 |
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| Symbol | |
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| ID | 4685332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | + |
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| Start bp | 56724 |
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| End bp | 58019 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639826044 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_973209 |
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| Protein GI | 121582767 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.256436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCT CGATAAAAAT TCGCGGCCTG TTGCCGCTGG CGGCTCTGGC CGCTGCGCTG
CTTGCCGGCA ACGCCGCCGC CGAGTCCCTG CAACAGGCAT GGGACATTGC ACTGACCGTT
GACCGTGGGC TCAAAGCCTC ACGCGAAAGC ACCGCCGCCG CGTCCAGCCT GCTGGATGCG
GCCAAATCCG CCCGCCTGCC CAACCTGGCG CTGGAGGCGG GCTATACCGC CCTCGATAAG
GCACCGGCGG CCAGGGTTGA TTTTTTTGGC CAGTCGCTGC AAATGCCGCT GGCGCAAAAG
GACAGCGCCG CCTACCGCGC CATGGCGACG CTTCCGCTCT ACACCGGTGG TCGCATTGAG
CGCGGCATTG ACGCGGCCAC GGCAGGCATG GATGCGGCGC GGCTGGGCGA AACCGCCGAT
GCACAGAACC TCAAACTGCG CGTGGCGGAT GCCTATGTCA ACGTGCTGCG CGCCAGCCGC
ATGCTGAAGG TCACTGAGAG CCACGTCGCC AGCCTGCAGG CCCATGCGCG TGACGTGGGC
AACCTGCACG AGCAGGGCAT GGTGGCCAAA AGCGACCTGC TCTCTGTGCA GGTGGCCCTG
GCCGATGCGC GCCAGCGCCA TCTGCAGGTG GCCAATGGGC TGGATCTGGC GCGCGCCGCC
TACAACCGCC TGCTGGGGCG GCCGCTGGAT CAGCCCGTCG CGCTCGACGA CCTGTCGCCC
GAGACGGCGC AAGAGCCGCT CCCCGCCCTG AGCGAGCGGG CACTGGCCCG GCGCAGCGAG
CTGGCGGCAC TGGCGCGTCA AATTGAAGCG ATGCGCCACC AGGCCGCCGC CGTGCGCGGC
GAAACCGCCC CGCAGGTCGC GCTGTCCGGC GGTTACGGCT ACCAGGAGAA CCGCTATCAG
GTGCATCAAG GGCAATGGAT GGTCACCCTG GGGGTCAAGT GGAGCCTGTT CGACGGTGGC
GTGGTCAGCC ACCGCGCCAA TGCTGTCGAG CGCCAGGCCG CGGCATTGAC GGAGCAACGC
GATGAGCTGG CCTCCATCAT CGCCCTGCAG GTCCGCCAGA CCTGGCTGGA CGTGCAAGAG
ACCCGCAAGC GCCTCATCGT CACCCAGTCA GCCATCGCCC AGGCCGAGGA GAACCTGCGC
GTGGCGCGCG ACCGCTATGC CAACGGCCTG TCCACCCATA CCGAAGTGCT CGATGCCGAG
ACCTTGCGCA CCGGCAGCGA GGGCAACCAC GCCAATGCGC TGTCTGATGC CGCACTGGCG
GGGTTGCGGC TGAAGCGCGC CACGGGTGAG CTCTGA
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| Protein sequence | MNRSIKIRGL LPLAALAAAL LAGNAAAESL QQAWDIALTV DRGLKASRES TAAASSLLDA
AKSARLPNLA LEAGYTALDK APAARVDFFG QSLQMPLAQK DSAAYRAMAT LPLYTGGRIE
RGIDAATAGM DAARLGETAD AQNLKLRVAD AYVNVLRASR MLKVTESHVA SLQAHARDVG
NLHEQGMVAK SDLLSVQVAL ADARQRHLQV ANGLDLARAA YNRLLGRPLD QPVALDDLSP
ETAQEPLPAL SERALARRSE LAALARQIEA MRHQAAAVRG ETAPQVALSG GYGYQENRYQ
VHQGQWMVTL GVKWSLFDGG VVSHRANAVE RQAAALTEQR DELASIIALQ VRQTWLDVQE
TRKRLIVTQS AIAQAEENLR VARDRYANGL STHTEVLDAE TLRTGSEGNH ANALSDAALA
GLRLKRATGE L
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