| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4180 |
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| Symbol | |
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| ID | 4685450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | + |
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| Start bp | 52349 |
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| End bp | 53449 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639826042 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_973207 |
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| Protein GI | 121582765 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.249201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACC CTCTTGTGAA AAAAAGAAAA AACCTCCTCC TCTACTTGGC GCCGCTGGCG
CTGGCCGCAC TCCTGGGTGC TTGCGGCAAA GCGCCGGAGG CCCCTGCCGC ATCAAATACG
ACCAGCCGCC CCCTGCCGGT CATGACCGCG TCCGCCGGGG CGCCGCTCGA ATACACGGCG
GTCGGCTCGG TGGTGTCGGA CCAGCGCGTC GAGGTCGCCT CACGGCTGAG CGGCTATATC
CGCGACATGC TGGTGCAGGA GGGTGACCGG GTGCGGCGCG GGCAGTTGCT GACCCGCCTT
GACGCATCGG ATGTGGAAGG CGGCATCCGC CAGGGCCAGG CGGCGGGCGG CGCGGCAGAG
GCGGCGCTGC GCGATGCGCA GATTGACCTG GAGCGCTTCC AGCGTTTGTT CGAGCGCGGC
AGCGTCTCGG ACAACGAATT GCGCAAGGTG CGCCTGAAAT TCGAGGCCGC GCGCGAGGCC
CGTAACCAGG CGCGCGCCGG TCTCGACACG GCGCTGGCCC AGCGCGCCTA CGCCGAAATC
ACCAGCCCGG TGGACGGCGT GGTGGTGGCG CGCCACAAAC GAACGGGCGA CCTCGCCCTG
CCCGGCATGC CGCTGCTGAC CCTGGAGTCG GGCCGCGGCC TGTTGTTCGA GACCTTCGTG
GCGGAGGGCC AAGTCGCCGC CATCGCGGCC GGCCAGCCGG TGCAAGTCAA CATCGACGGC
GTGCCCGCGG CGCTCAAGGG CACGGTGAGC CGGGTGGTGC GCTCGGGCGA CCCGGTCTCG
CGCAGCTACC AGGTCAAGAT CACCCTGCCC GAGACGGCGG GGCTGATGCC CGGCATGTTC
GGGCGTGCGG CGTTCGGGCT CGGTGCGAGC CAGGCGCCAT TGGTGCCCAG ACAGGCGTTG
GTCGAGCGCG GCGGGCTCAC CGGTGTCTTC GTGGTTGATG CCGAAGGCCG GGCACGCTTT
CGCTGGCTGC GCATAGCCCG CGAGTGGCCC GATCAGGTCG AGGTGAGTGC TGGTCTGGCC
GCCGATGAGC GCTTCGTGGC AGCGGCTACA CCGGCCCTGC GCGAGGGCGA CCGCGTCACC
GCCGCGAAGG AGGCGCAATG A
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| Protein sequence | MKDPLVKKRK NLLLYLAPLA LAALLGACGK APEAPAASNT TSRPLPVMTA SAGAPLEYTA
VGSVVSDQRV EVASRLSGYI RDMLVQEGDR VRRGQLLTRL DASDVEGGIR QGQAAGGAAE
AALRDAQIDL ERFQRLFERG SVSDNELRKV RLKFEAAREA RNQARAGLDT ALAQRAYAEI
TSPVDGVVVA RHKRTGDLAL PGMPLLTLES GRGLLFETFV AEGQVAAIAA GQPVQVNIDG
VPAALKGTVS RVVRSGDPVS RSYQVKITLP ETAGLMPGMF GRAAFGLGAS QAPLVPRQAL
VERGGLTGVF VVDAEGRARF RWLRIAREWP DQVEVSAGLA ADERFVAAAT PALREGDRVT
AAKEAQ
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