| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4178 |
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| Symbol | |
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| ID | 4685235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | + |
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| Start bp | 50579 |
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| End bp | 51550 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639826040 |
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| Product | patatin |
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| Protein accession | YP_973205 |
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| Protein GI | 121582763 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.222124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAC CACAAACCAG CAAAGCCCCG GCGGCAAGCC TGACGCCGCC CAAGCGGCCC
CGGATCGGCC TGGCGCTGGG CAGCGGTTCG GCGCGCGGTC TGGCGCACGT CGGCGTGCTG
CGCGCCTTGA AAGAGGCCAA CATCGAGATC GACCTGGTGG CCGGCACCAG CATGGGGGCG
GTCATTGGCG CTGTCTTTGC CTCGGGCAAG ATTGACGGCC TGAGCGCCAG ACTGCGCAAT
CTCGACTGGC CGGGCATCGT CGCCCTGCTC GACCCGGTGT TTCCCCGCTC GGGGCTGATC
GACGGCCAGC GGGTCGCCGA ATTCGTGCGC GCCCATGTGC CAAGCGCCCA TATCGAGGGC
CTGTTGCTGC CCTTTGCCGC GGTGGCCACC GACCTCATGA CGGGAGAAGA AGTGGTGACC
ACGGCAGGCG ACCTGACCGA AGCGGTGCGT GCCAGCATCG CCGTGCCCGG CATCTTTACC
CCGGTGCGCA GCAACGGCCG CATCCTGGTC GATGGCGGGC TGGTCAATCC GGTGCCGGTG
AGCGTGGCGC GCGCCATGGG GGCCGACCTG GTCATCGCGG TCGACCTCAA CCACGACATC
GTGGCGGGCC GGCTGTCCCA CCCCGCCGCC CACGCCAATG GCAACGGCCA TGGCCCCATC
ATGGCGCGCC TGCTGGAGAG CCTGCGGGCC ATCAATAGCC CGGTGCTGGC GCAGTTCGAG
GCCTGGCTGC ACAAGCCCAC TCTGGAGCCG CTACCAGGCA TTTTCGAGGT GCTGCTCGCT
TCGATCTACA TCATGCAGGC GCGCGTCACC GAAGCCGACC TGCGGCAAAC CCAACCCGAC
CTCCTGATCC AGCCGCCGCT GGGCGCGGTG CGCTTCATGG AGTTCGACCG CGCCGAAGAA
ATCATCGACA TCGGCTACCG CAGCGCGGCC GAGCAACTGG CCCGCTGGAC AAGAACGCCA
ACCCATGACT GA
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| Protein sequence | MNEPQTSKAP AASLTPPKRP RIGLALGSGS ARGLAHVGVL RALKEANIEI DLVAGTSMGA
VIGAVFASGK IDGLSARLRN LDWPGIVALL DPVFPRSGLI DGQRVAEFVR AHVPSAHIEG
LLLPFAAVAT DLMTGEEVVT TAGDLTEAVR ASIAVPGIFT PVRSNGRILV DGGLVNPVPV
SVARAMGADL VIAVDLNHDI VAGRLSHPAA HANGNGHGPI MARLLESLRA INSPVLAQFE
AWLHKPTLEP LPGIFEVLLA SIYIMQARVT EADLRQTQPD LLIQPPLGAV RFMEFDRAEE
IIDIGYRSAA EQLARWTRTP THD
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