Gene Pnap_4139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4139 
Symbol 
ID4685473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008757 
Strand
Start bp14356 
End bp14679 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content63% 
IMG OID639826003 
Productputative transcriptional regulator 
Protein accessionYP_973168 
Protein GI121582726 
COG category[K] Transcription 
COG ID[COG3636] Predicted transcriptional regulator 
TIGRFAM ID[TIGR02684] probable addiction module antidote protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.071007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.169565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGAA GTAGACCCCA TGACGATGCG ATGGCCGAGT TGTACCGAAA CGACCCCGCG 
TTCGCGCTGG AAGTGGTCAA CGGCATTCTG GAAGATGGCG ACCAGGCCGA ACTGCTGATC
GTGCTGCGTC AAATGGCCGA GGCCTTCGGC GGCGTTCAGG CGGTGGCCGA ACAGGCGCAC
CTGAATCCGA CGCAGCTTTA TCGCACGCTC TCCCCGAAGG GCAATCCGGC ACTTAACAGC
TTGCGGGCAA TCCTCAAGGC GATGGGTCTG CGGCTGGCGG TGCAGCCGTT GGCTGCACCC
GCCGTGCCAG CGCATGCCAC CTGA
 
Protein sequence
MMRSRPHDDA MAELYRNDPA FALEVVNGIL EDGDQAELLI VLRQMAEAFG GVQAVAEQAH 
LNPTQLYRTL SPKGNPALNS LRAILKAMGL RLAVQPLAAP AVPAHAT