| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4793 |
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| Symbol | |
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| ID | 4667571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 5349653 |
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| End bp | 5351350 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639825985 |
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| Product | protein translocase subunit yidC |
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| Protein accession | YP_973098 |
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| Protein GI | 120613420 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA TTCGCCGTAC CATCCTGTGG GTGATATTTG GCTTTTCCAT GGTTCTGCTG
TGGGACAAAT GGCAAGTACA CAACGGCCAC AAGGCCACGT TCTTCCCGGA GCCCGTGCCG
GCCCAGGTGG CGTCCGCGCC GGCCGGCGGC GGCGCCAGCG CCCCGGGCAG CGTGCCCACG
CCCAGCGCGG CGCCCGCGGC GGGTACGCAG CAGGTGCCCG GCGGCACGGC GGCCGCGGCC
CCTGCAGCGC CGCGCGAGCG CGTGACCGTC ACCACGGACG TGCTGCGCCT GACCTTCGAC
AGCGAAGGCG GCACCCTCAC GCACGGCGAA CTGCTGGGCT ATCCCGACAT GGCGGACAAG
TCCCGCCCGT TCACGCTGCT GGACGACAGC GCCCAGCGCG TCTATGTGGC GCAGACCGGC
CTGATCGGTG GCGCGAACTA CCCCACGCAC AAGACGCCCA TGACCGTGGT GCCGGGCAAC
CGCACCCTGC AGGACGGGCA GAACGACATC AGCATCCGCT TCGAGTCGCC CGACCTGGGC
GGCGTGAAGC TGGTCAAGAC CTGGACGGTG AAGCGCGGCG CGTATGACAT CGCCGTGAAG
CACGAGGTGG TCAACACGGG CACGACGCCC GTGTCGCCGC AGCTCTACAT GCAGTTGGTG
CGCGACGGCA ACAAGCCGCC GGGAGAGTCG TCGTTCTACT CCACCTTCAC CGGCCCGGCC
GTCTATACCG AGGCCAGGAA GTACCACAAG GTCGAGTTCA AGGACATCGA GAGCGGCAAG
GCCGAGATCG ACAAGTCGTC CACCAACGGC TACGTGGCCA TGGTGCAGCA CTATTTCGCG
ACCGCCTGGC TGCTGGCCGA CGGCATCCAG CGCGACCTGT TCGTGCGCAA GGTGGACACC
AACCTCTATT CGGTGGGCAT GATTACCTCC GTGGGCGAGA TCGCCCCGGG CCAGTCGAAG
ACGCTGGACG CGCGCCTGTT CGCCGGCCCG CAGATCGAAA CCATGCTGGA GAAGCTGTCG
CCCGGCCTGG AACTGGTGAA GGACTACGGC TGGCTCACCA TCCTGGCCAA GCCGCTCTAC
TGGCTGCTCG AGCAACTGCA CAAGATCCTG AACAACTGGG GCTGGTCCAT CGTGGGCCTG
GTGCTGCTGC TCAAGATCGC CTTCTACTGG CTCAACGCCA AGGCATACGC CTCCATGGCC
AAGATGAAGG CCATCAACCC GAAGATCATG GAGATGCGCG AGCGCCTCAA GGACAAGCCG
CAGCAGATGC AGCAGGAGAT GATGCGCATC TACCGCGAGG AGAAGGTCAA CCCGATGGGC
GGCTGCTTCC CCATCATGAT CCAGATCCCC GTGTTCATCG CGCTGTACTG GGTGCTGCTG
TCGAGCGTGG AAATGCGCAA TGCGCCCTGG ATCGGCTGGA TCCACGACCT GTCCTCGCCC
GATCCGTTCT TCATCCTGCC CCTGCTGATG ACGGCCAGCT CGCTGTTGCA GACGGCGCTC
AACCCCGCGC CGCCGGACCC GATGCAGGCC AAGATGATGT GGTTCATGCC GCTGATCTTC
AGCGTGATGT TCTTCTTCTT CCCGGCCGGC CTGGTGCTGT ACTGGCTGAC GAACAACATC
CTGTCGATCG CCCAGCAGTG GATCATCAAC AAGCGCATGG GCGTGCCGCC GCAGTTCAAC
CTGCCGAAGT TCCGCTGA
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| Protein sequence | MNDIRRTILW VIFGFSMVLL WDKWQVHNGH KATFFPEPVP AQVASAPAGG GASAPGSVPT
PSAAPAAGTQ QVPGGTAAAA PAAPRERVTV TTDVLRLTFD SEGGTLTHGE LLGYPDMADK
SRPFTLLDDS AQRVYVAQTG LIGGANYPTH KTPMTVVPGN RTLQDGQNDI SIRFESPDLG
GVKLVKTWTV KRGAYDIAVK HEVVNTGTTP VSPQLYMQLV RDGNKPPGES SFYSTFTGPA
VYTEARKYHK VEFKDIESGK AEIDKSSTNG YVAMVQHYFA TAWLLADGIQ RDLFVRKVDT
NLYSVGMITS VGEIAPGQSK TLDARLFAGP QIETMLEKLS PGLELVKDYG WLTILAKPLY
WLLEQLHKIL NNWGWSIVGL VLLLKIAFYW LNAKAYASMA KMKAINPKIM EMRERLKDKP
QQMQQEMMRI YREEKVNPMG GCFPIMIQIP VFIALYWVLL SSVEMRNAPW IGWIHDLSSP
DPFFILPLLM TASSLLQTAL NPAPPDPMQA KMMWFMPLIF SVMFFFFPAG LVLYWLTNNI
LSIAQQWIIN KRMGVPPQFN LPKFR
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