| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4791 |
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| Symbol | trmE |
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| ID | 4665572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 5346321 |
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| End bp | 5347769 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639825983 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_973096 |
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| Protein GI | 120613418 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCCC GCCACACCGA TCCCATCGCC GCCATCGCCA CCGCACCGGG GCGGGGCGCC
GTGGGCATCG TGCGCGTGTC GGGCCGCGGG ATCGGCCCGC TGGTGGAAGC GCTCTGCGGG
CGTGCGCTGC GCCCGCGCGA GGCCACCTAC CTGCCGTTCC GCGATGCCGG GGGGCAGGCC
ATCGACCAGG GGCTGGCGCT GTATTTTCCC GCGCCGCACA GCTACACCGG AGAGGACGTG
CTGGAGCTGC AGGCGCACGG CGGCCCCGTG GTGCTGCAAC TGCTGCTGGC CCGCTGCCTG
CAGGCCGCCG GCGAGGCGGA CCGTGCCACG GGCCGGCCGC GCCTGCCGGG CCTGCGGCTG
GCGCGGCCCG GCGAGTTCAC CGAGCGCGCG TTCCTGAACG ACAAGATCGA CCTCGCGCAG
GCCGAGGCGA TCGCCGACCT GATCGACGCC AGCACCGAAG CCGCCGCGCG CAGCGCCAGC
CGTTCGCTGG CGGGTGCCTT CTCCGACGAG ATCCACCGGC TGCGCGATGC GCTGGTGCAC
CTGCGCATGC TGGTGGAGGC CACGCTCGAT TTTCCGGAGG AAGAGATCGA TTTCCTGCGC
AAGGCGGATG CCCATGGCCA GCTGGCGGCG CTGCAGCGCA CGCTGGCGGA GGTGATGGGG
CGCACGCGGC AGGGCGCGCT GCTGCGCGAG GGCATCAAGG TGGTGATCGC GGGCCAGCCC
AACGCGGGCA AGAGTTCGCT GCTGAACGCC CTGGCCGGCG CGGAGCTGGC CATCGTGACG
CCGATCGCCG GCACCACGCG CGACAAGGTG CAGCAGACCA TCCAGATCGA GGGCGTGCCG
CTGCACGTGA TCGACACGGC GGGCCTGCGC GAGAGCGACG ACGAGGTGGA GCGGATCGGC
ATCGAGCGCG CCTGGCAGGA GATCGCCGCG GCCGACGCGG TGCTGTTCCT GCACGATCTC
ACGCGCGCGG GCCAGCCGGA TTACGAAGCG GCGGATGCGG AGATCGCGGC CCGTCTCGCC
CGCATGGCGC CGGCGCATGT GCCCGTGGTC GATGTGTGGA ACAAGAGCGA CCGCGCGGAG
GGCTCCGCAG CAGCAGGGCA GGGCGGAGTC GCCACGGCGT CCGCGTCCGG CCGGGCTGCC
GCCGTGCGCC TGTCCGCGCG CACGGGCGAG GGCCTGGACG GGCTGCGGCG CGTGCTGCTG
GACATCGCCG GCTGGCAGTC CGCGCCGGAG GGCATCTACA CCGCGCGTGC GCGCCACCTG
GAAGCACTGC GGGCGGTGGA CATGCACCTG ATGGAGGCGG CGGCGCAGTT GCAGTGCGAC
GGCCCCGCGC TCGACCTCCT GGCCGAGGAG CTGCGGCTGG CGCAGCAGGC GCTGAACGCC
ATCACAGGGG AGTTCACGTC CGACGATCTG CTGGGGGTCA TCTTCTCGAG TTTCTGCATC
GGGAAGTAG
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| Protein sequence | MLPRHTDPIA AIATAPGRGA VGIVRVSGRG IGPLVEALCG RALRPREATY LPFRDAGGQA
IDQGLALYFP APHSYTGEDV LELQAHGGPV VLQLLLARCL QAAGEADRAT GRPRLPGLRL
ARPGEFTERA FLNDKIDLAQ AEAIADLIDA STEAAARSAS RSLAGAFSDE IHRLRDALVH
LRMLVEATLD FPEEEIDFLR KADAHGQLAA LQRTLAEVMG RTRQGALLRE GIKVVIAGQP
NAGKSSLLNA LAGAELAIVT PIAGTTRDKV QQTIQIEGVP LHVIDTAGLR ESDDEVERIG
IERAWQEIAA ADAVLFLHDL TRAGQPDYEA ADAEIAARLA RMAPAHVPVV DVWNKSDRAE
GSAAAGQGGV ATASASGRAA AVRLSARTGE GLDGLRRVLL DIAGWQSAPE GIYTARARHL
EALRAVDMHL MEAAAQLQCD GPALDLLAEE LRLAQQALNA ITGEFTSDDL LGVIFSSFCI
GK
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