Gene Aave_4788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4788 
Symbol 
ID4668772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp5341939 
End bp5344617 
Gene Length2679 bp 
Protein Length892 aa 
Translation table11 
GC content75% 
IMG OID639825980 
Productflavodoxin/nitric oxide synthase 
Protein accessionYP_973093 
Protein GI120613415 
COG category[P] Inorganic ion transport and metabolism
[S] Function unknown 
COG ID[COG0369] Sulfite reductase, alpha subunit (flavoprotein)
[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCCTT CCACCCCGGC CGCGCCGGAC CATCGGCGCA GGGCATTCGC ATGGCCCGGG 
CTGCGCGCCG CCGTCGTCCA GTTGCACTGG TTCGCCGGCA TCACGGCCGG CACCCTGCTC
GTGGCCATCG GCCTGTCGGG CGCGCTGCTG GCCTTCCGCG AGGAAATCCT CGACCTGCTC
AATCCGGGCG TTCGGCATGT CGCCCCCCAG GCCGGCCCGG CGCTGACGCC GCCCCAGTTG
CTGGAAGCCC TGGCCCGCGA CGGCGCCGCC GGGCGCCGCG TGAATGTGCT CACCGTGCAG
TCCACGCCGG GCGTAGCCGC ACGGGTCGGC TTCGCCGCCC TGCCCGGTGA GCGCCGCGGC
GATACGGAAT ACCTGCATCC CTACACCGGC GCCGCGCAGC CCGCACTGCG CGGGGACGGC
TTCTTCGAAT GGGCCGAAGC CCTGCACCGC TGGCTGCTGC TGCCGCGCGA GCCGGGCCGC
GTGGCCTCCG GCGTGCTGGC CCTGTGCCTG CTGGGCCTGT CGCTGTCCGG GCTGTATCTG
CGCTGGCCCC GCCACCCGCT GCGCTGGCGC GCCTGGTTCG CGCTCGACAC GCGCCGCAAG
GGCCGTCCCT TCCTCTGGAG CCTGCACGCG GTGGCCGGCA CCTGGGTCCT GGCCGTCTAT
GTGGGGCTCA CCGCCACCGG GCTGTACTGG GCCTTCGACA CCGTCCGCGA CACCGTGGAC
GCATGGGCCG GACAGCCGCG CCCGCCCCGC CAGGCCACGG CCGCTCCAGC GCACGCCGCC
AAGACACCGG CCCAGGCAGA TCCGGCCCGA CCCATGGATC TCACCGCTGC CTGGCGCGCG
TTCTCGCAGC GGGCCCCGGA CTGGCAGACG GCCGTGCTGC GGATGCCCCA GCGCGCGGAC
CAGCCCCTGC AGATCCTCTG GCTGGACCGC AACGCACCGC ACGACCGGGC CCGCCACCGC
ATGGTGATCG ACACGGTGAC CGGCGCGGTC GCCACGGACG ACCGCTATGG CCAGCGCAGC
GCCGCGGTGC GCGCGCTCTC CACCTTCTAC CCGCTGCACA TGGGCACGTA CTTCGGCCTG
CCCGGCCGCA TAGCGGTCAC CGCCGCCGCC CTGGCCCTGC CGCTTTTCGC CGTGACGGGC
TGGATGCTCT ACCTCGGCCG GCGCCGCCAG CGCAGGGAGG CCGAAACCGC CCGGCAGGCC
GTGGCGGTGC CGGCCGGCCC CCTCACCGCC AGCGGCTCCG CGAACGCAGC GGACACCGTC
CTGGTGGCCT ACGCCAGCCA GTCGGGAACG GCCGAGCGCA TCGCCCGGCA GACGGCCGCG
GCCCTGCACC AGTCCGGCCT GCCTTCGCAG GTCCGCGCGC TGCAGCATCT CGCGCCGGAA
GACCTCGCGG GCCAAGCGCG CATCCTGGTG GTGGCAAGCA GCTTCGGCGA GGGCGAGCCG
CCGGACACGG CGCGGCGCTT CATGCGCCTC CTGCAGCGCG GACCGTCGCG GGGCGCCCAT
CCGCTCGCGT CCGTGCGCTA TGCGCTGCTG GCGCTCGGCG ACCGGCACTA CACGCACTTC
TGCGGCTTCG GCCATGCCCT GGACGGGGAG CTGCGCCGCT GGGGCGCCCA GCCCCTGTTC
CCGCTGATCG AGGTGGACGG CGGCGATGCC GGCGCCCTGG CCCGCTGGCG CGAAGCGCTC
ACGGCACTGG AGGGCGCGCG CGCCTGGGCA GCCGATGCCC CGGCCCTGCA GGCCCCGTCC
CTTTCAACGG ACCTGGAGTC CTGGCGGCTC GAAAGCCGGG AGACGCTCAA CCCCGGCAGC
CTGGGCAATC CCCTGGTGGA GATCACGCTC AAGCCCGCGG TGGCCGGCAC CCCGCTCCAC
TGGCCGGCCG GGGCCCTCGT GGACCTGCTG CCTCGCCAGC CCGCGGACGC GGTCGGGCGC
TGGCTGCGCG AGGCAGGCCT CGACGGCCAG GCCCCCGTCC AGGCCGGTGG AGCGCCCGAG
CGGCTGGCCG ACGTGCTGGC GCGCAGCGTG TTGCCCGCCC TGCCGCTACC GGAACGCCTG
CATGCGCAGG CCTGCGCGGA TGCGCTCGTT CCCCTCGCGC CCCGCACCTA CTCCATCGCC
TCCCTGCCGG AAGACGGCGC GCTGCAACTG CTGGTGCGAC AGGAGCGGCA TGCCCAGGGC
CTGGGCATCG CGTCCGGCTG GCTGACCGCG CATGCCCCGC TGGGCAGCAT CCAGACGCTG
CGCTTCGTCG AGAACCCGTG CTTCGGCCTC GAAGGCACCG AAGGGCGCCC CTGCCTCTTC
ATCGGCAACG GCTCCGGGCT GGCGGGCCTG CGGTCGCTGC TGCGCGCCCG CGTGCGCGCC
GGACAACAGC GCAACTGGCT GCTCTTCGGC GAGCGGCAGC GCGCGGCCGA CACCCTGTGC
GCCGGGGAAA TCGCGCACTG GCAGGCCCGG GGCTGCCTGC CGCGCCTGGA CCTGGCGTTC
TCCCGCGATG CCGATGCGCC GCACCGCTAC GTCCAGGACG CCCTGCGGGC GGCCATGCCG
GAACTGCGCC GGTGGCTGGA CGATGGGGCC GTGGTGTTCG TTTGCGGCAG CGCCGAAGGC
ATGGGCGCGG GCGTGGACCA CGTGCTCTCC GACGCGCTGG GCGCCGAAGG CATGGATGCG
CTCATCGACG CCGGCCGCTA CCGCCGCGAC GTCTATTGA
 
Protein sequence
MPPSTPAAPD HRRRAFAWPG LRAAVVQLHW FAGITAGTLL VAIGLSGALL AFREEILDLL 
NPGVRHVAPQ AGPALTPPQL LEALARDGAA GRRVNVLTVQ STPGVAARVG FAALPGERRG
DTEYLHPYTG AAQPALRGDG FFEWAEALHR WLLLPREPGR VASGVLALCL LGLSLSGLYL
RWPRHPLRWR AWFALDTRRK GRPFLWSLHA VAGTWVLAVY VGLTATGLYW AFDTVRDTVD
AWAGQPRPPR QATAAPAHAA KTPAQADPAR PMDLTAAWRA FSQRAPDWQT AVLRMPQRAD
QPLQILWLDR NAPHDRARHR MVIDTVTGAV ATDDRYGQRS AAVRALSTFY PLHMGTYFGL
PGRIAVTAAA LALPLFAVTG WMLYLGRRRQ RREAETARQA VAVPAGPLTA SGSANAADTV
LVAYASQSGT AERIARQTAA ALHQSGLPSQ VRALQHLAPE DLAGQARILV VASSFGEGEP
PDTARRFMRL LQRGPSRGAH PLASVRYALL ALGDRHYTHF CGFGHALDGE LRRWGAQPLF
PLIEVDGGDA GALARWREAL TALEGARAWA ADAPALQAPS LSTDLESWRL ESRETLNPGS
LGNPLVEITL KPAVAGTPLH WPAGALVDLL PRQPADAVGR WLREAGLDGQ APVQAGGAPE
RLADVLARSV LPALPLPERL HAQACADALV PLAPRTYSIA SLPEDGALQL LVRQERHAQG
LGIASGWLTA HAPLGSIQTL RFVENPCFGL EGTEGRPCLF IGNGSGLAGL RSLLRARVRA
GQQRNWLLFG ERQRAADTLC AGEIAHWQAR GCLPRLDLAF SRDADAPHRY VQDALRAAMP
ELRRWLDDGA VVFVCGSAEG MGAGVDHVLS DALGAEGMDA LIDAGRYRRD VY