Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4782 |
Symbol | |
ID | 4665235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 5335917 |
End bp | 5336711 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639825974 |
Product | short chain dehydrogenase |
Protein accession | YP_973087 |
Protein GI | 120613409 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCCTC GTCCCCTGGC CTTCATCACC GGCGCCTCCA GCGGTATCGG GCAAGCCCTG GCGCTGCGCT ACCGGCAGGC CGGGTTCCGC CTGGCGCTGG TGGCGCGGCG CACCGCGGAG ATCCAGGCCT GGGCGGCCGC CAGCGGCCTC GCGGCGGACG ATTTCCGCGT GTACGGCGCC GACGTGGCGC AGGCCGACAG CATCATCGGG GCCGGCAAGG CCTGCATCGC GGAACTGGGG CTGCCCGACG TGGTGATCGC GAATGCCGGC ATCAGCGTGG GCATGGACAC GGCGGAGCGC GAGGATCTCG ATGTCATGGC GCAGACCTTC GCGACCAACA ACCTCGGCAT GGCGGCCACC TTCCATCCGT TCGTGTCCGC CATGGTCGAG CGCGGCAGCG GCGCGCTGGT GGGTATCGGC AGCGTGGCGG GCATACGGGG GCTGCCCGGG CACGGCGCCT ACTGTTCCAG CAAGGCCGCC GTGATCAGCT ATTGCGAGAG CCTGCGGGGC GAGCTGCGGG CCAGCGGCGT GCGGGTGGTC ACCCTGTGCC CGGGGTACAT CGATACGCCG CTCACCCGCC AGAACCGCTA CGCCATGCCG TTTCTCATGC AGCCCGGGGA CTTCGCGGAC AAGGCGTATG CGGCCATCGC GGCAGGCGCG CGCTACCGTG TGATTCCCTG GCAGATGGGC GTGGTGGCCA AGCTGCTGCG CATGCTGCCC GGCAGCCTGT TCGACCGGCT GCTGGCCGGA CGGCCGCGCA AGCACAGGCG CGGCGGGGCT GGCCCGGCCT CCTGA
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Protein sequence | MHPRPLAFIT GASSGIGQAL ALRYRQAGFR LALVARRTAE IQAWAAASGL AADDFRVYGA DVAQADSIIG AGKACIAELG LPDVVIANAG ISVGMDTAER EDLDVMAQTF ATNNLGMAAT FHPFVSAMVE RGSGALVGIG SVAGIRGLPG HGAYCSSKAA VISYCESLRG ELRASGVRVV TLCPGYIDTP LTRQNRYAMP FLMQPGDFAD KAYAAIAAGA RYRVIPWQMG VVAKLLRMLP GSLFDRLLAG RPRKHRRGGA GPAS
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