Gene Aave_4780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4780 
Symbol 
ID4668043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp5334640 
End bp5335011 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content69% 
IMG OID639825972 
ProductRNP-1-like RNA-binding protein 
Protein accessionYP_973085 
Protein GI120613407 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAACA AACTCTACGT GGGCAACCTG CCCTATTCCT TCCGCGACGA CGATCTGCAA 
CAGACGTTCA GCCAGTACGG TTCCGTGGCC AGCGCCAAGG TCATGATGGA ACGCGACACC
GGCCGCTCCA AGGGCTTCGG CTTCGTCGAG ATGGGCAGCG ATGCCGAGGC ACAGGCCGCC
ATCCAGGGCG CGCACGGCCA GAACTTCGGC GGCCGCGACC TCGTGGTCAA CGAAGCCCGT
CCGATGGAAC CCCGTCCCCC CCGCAGCGGT GGCTTCGGTG GCGGCAACGG CGGCGGCTTC
GGCGGTGGCC GCAGCGGCGG CGGCTACGGT GGCGGCAATG GCGGTGGCTA CGGCGGCGGT
CGCGGCTACT GA
 
Protein sequence
MGNKLYVGNL PYSFRDDDLQ QTFSQYGSVA SAKVMMERDT GRSKGFGFVE MGSDAEAQAA 
IQGAHGQNFG GRDLVVNEAR PMEPRPPRSG GFGGGNGGGF GGGRSGGGYG GGNGGGYGGG
RGY