Gene Aave_4779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4779 
Symbol 
ID4665745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp5333601 
End bp5334179 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content68% 
IMG OID639825971 
Producthypothetical protein 
Protein accessionYP_973084 
Protein GI120613406 
COG category[S] Function unknown 
COG ID[COG2119] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCTT TCCTCGTATC CACGTCCATC GTCGCGCTCG CGGAGATGGG CGACAAGACC 
CAGCTCCTCT CCCTCGTCCT GGCGGCCCGC TTCCGCAAGC CCTGGCCCAT CGTGCTGGGC
ATCCTGGTGG CCACCACCGC CAATCACGCG CTCGCCGGTG CCGTGGGCGC CTGGGTGACC
ACCGTCATCG GGCCGCAGAT GCTGCGCTGG ATCCTCGGCC TGTCGTTCAT CGCCATGGCG
GTGTGGATGC TCATTCCCGA CAAGCTGGAC GACGACGAGA CGGGCGGCAC TCCGCGCTTC
GGCGTGTTCG GCACCACGCT GGTGGCGTTC TTCCTCGCCG AGATGGGCGA CAAGACGCAG
GTCGCCACCG TCATGCTGGC CGCCCAGTAC AGCGCCTATT TCTGGGTGGT GGCGGGCACG
ACGCTGGGCA TGATGCTCGC CAACGCGCCG GTGGTCTGGC TGGGCGAGCG CATCACCCGG
CGCGTGCCGA TCCGCGCGGT GCACGTGGTG TCGGCCGTCA TCTTCGTGGT GCTGGGGCTT
GTCGCGCTGT TCGCACCGGC CCCCGGTCCT TTGGCATAA
 
Protein sequence
MEAFLVSTSI VALAEMGDKT QLLSLVLAAR FRKPWPIVLG ILVATTANHA LAGAVGAWVT 
TVIGPQMLRW ILGLSFIAMA VWMLIPDKLD DDETGGTPRF GVFGTTLVAF FLAEMGDKTQ
VATVMLAAQY SAYFWVVAGT TLGMMLANAP VVWLGERITR RVPIRAVHVV SAVIFVVLGL
VALFAPAPGP LA