| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4763 |
|---|
| Symbol | |
|---|
| ID | 4669862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 5311562 |
|---|
| End bp | 5312992 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639825955 |
|---|
| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_973068 |
|---|
| Protein GI | 120613390 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCATC GAGCATTCAT CCTGGGCCTC GCGGGCTTCG CCTCCGCCAT CGTTTCCGTC
GCGCCCGCGG GCGCGCAGGG CCTGCGCGTG CCCGGCGGCA CGGGGCTGTC GGCACCGTCG
GCCTCGCCAT CGCTGCGCGC CGCCCCCCAG ATCACGCTGC CGGACCCCGG CCCCTCGGCC
CGCGGCGCCG ACACGGCCCG GCAGGCCGAC TACATCGTCG CCGTGGTGAA CACCGAGCCG
ATCACCAACA ACGAGGTGCA GGCCCGCGTG GCGCGCGTGG AGCACCAGTT GGCCGCCCAG
GGCGGCGAAC GGCCGCCGCG GCGGGTGATC GCCCGCGAAG TGCTCGAACG CCTGATCAAC
GAGAAGATCC AGGTGCAGAT GGCCACCGAG AGCGGCATCA AGGTGGACGA CTACGCGGTT
TCCCAGGCCG AGCAGTCCGT CGCCCGGCAG AACAGCGTGA GCATTCCGGA AATGCACCGC
CGGCTCGCGG CCGACGGCAT CAGCCCGGAG CGCTTCCGCA GCGAACTGCG CAACCAGCTG
CTGATCCAGC GGCTGCGCGA GCGCGACGTG GAGTCGCGCG TGCGCGTGAG CGATCTCGAC
GTGGACCAGT ACATGCGCGA CCAGCAGCAG TCCGCGATGT CCGATCCGTC CAAGATCGAG
CTGAATCTCG GCCACATCCT CGTCTCCGTT CCCGAGAACG CCAGCCCGGA GGTGGTGGAG
CAGCGCCGCC AGCGCGCGCA GCAGGCCGCC GACCGCGTGC GGGCCGGCGA GGACTTCGCC
AAGGTTGCGC GCGACCTCTC CGACGCCCCG GAGGCGCCCA CCGGCGGCGA ACTGGGCCTG
CGCCCGGCCG ACCGCTACCC GGACCTCTTC CTGCGGACCG TCCAGCAGGT GCCTGTGGGC
GGCATCGCCG GCCCGGTGCG CTCGCCCGCC GGCTTCCATG TGCTGCGCGT GATCGAACGC
TCGCGCGCGG GCATTCCCGC CACGGCCCTG CAGAACCATG TCCGCCACAT CCTGCTGCGC
ACCGGGCCGC AGTTGACCGA AGCCGCCGCC GCGGAGCGGC TGGCCGAGTA CCGCCGCCGC
ATCCTGTCGG GCCAGGCCGA TTTCGCCACG CTCGCGCGCG AGCACTCCCA GGACGGCAGC
GCCAAGCAGG GCGGTGACCT GGGCTGGGCC GGCCCGGGTC GCTATGTGCC GGAGTTCGAG
GAGGCGGTGG ACGCCCTCAA GCCGGACGAG ATCAGCCAGC CCGTCGTGTC GCGCTTCGGC
GTGCACCTGA TCCAGTTGCT GGAGCGGCGC GAGGCCAAGC TCACGCAGCG CGAGCAGCGC
GACATGGTGC GCGATGCCGT GCGCGAGAAA AAGCTCGAGG AAGCGTTCAC CAACTGGGCC
CAGGAAGCCC GTGCCCGCGC CTACGTGGAA TACCGCGACG CGCCGCAATG A
|
|---|
| Protein sequence | MNHRAFILGL AGFASAIVSV APAGAQGLRV PGGTGLSAPS ASPSLRAAPQ ITLPDPGPSA
RGADTARQAD YIVAVVNTEP ITNNEVQARV ARVEHQLAAQ GGERPPRRVI AREVLERLIN
EKIQVQMATE SGIKVDDYAV SQAEQSVARQ NSVSIPEMHR RLAADGISPE RFRSELRNQL
LIQRLRERDV ESRVRVSDLD VDQYMRDQQQ SAMSDPSKIE LNLGHILVSV PENASPEVVE
QRRQRAQQAA DRVRAGEDFA KVARDLSDAP EAPTGGELGL RPADRYPDLF LRTVQQVPVG
GIAGPVRSPA GFHVLRVIER SRAGIPATAL QNHVRHILLR TGPQLTEAAA AERLAEYRRR
ILSGQADFAT LAREHSQDGS AKQGGDLGWA GPGRYVPEFE EAVDALKPDE ISQPVVSRFG
VHLIQLLERR EAKLTQREQR DMVRDAVREK KLEEAFTNWA QEARARAYVE YRDAPQ
|
|---|
| |