Gene Aave_4662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4662 
Symbol 
ID4669930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp5200719 
End bp5202161 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content76% 
IMG OID639825858 
ProductRND efflux system outer membrane lipoprotein 
Protein accessionYP_972971 
Protein GI120613293 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAGA CCCTCTCCCA CGGGCCCCGC CGCCTTCTCG GCGCGGCCGT CCTGTTCGCC 
CTGGCCGGCT GCGCGGCCAC CGCGCCGCCG CCGCGCGTCG ATGCCCCTGC GCCCGCCGGC
TGGCAGGCCC CGCTGCCGCA CCAGGGCCGC GTGGAAGATA TCGCGCGCTG GTGGGAGCGC
CTGGGCGATC CACTGCTCAC CGACCTGATC GCCGCCGCGC AGGACGTGTC TCCGGACGTC
GCCCAGGCCC GCTCGCGCGT GGAACAGGCC CGGGCCACGC AGATGGCCGC ACGCTCGGCG
CTGCTGCCGG GCGTGGATGC CCAGGGCAAC GCGAGCCGGG GCACCAGCCA GCAGGCTGCG
GGGCTGGCGA CGACCGTGCA GGGCGTCGTG CAGGCCAGCT GGGAGGTGGA CGTCTTCGGC
GGCAACGCCG CTGCCGCCGA GGCCGCGCGG CAGCGCCTGG CCGGCGCGCA GGCCCGGTGG
CACGAGGCCC GCGTGTCGGT GGCCGCGGAA GTCGCCACGC AGTACGACGC ATGGCGGCAG
TGCCTGCGGC TGGCGGACGT GGCGCAATCC GATGCCCGCT CGCGCTCCGA GAGCGCGCGC
CTCACGGAAG CCAGCGAACG CGCGGGCTTC ACCGCGCCGG CCACGCTGGC GCTCGCCCAG
GCCAGCGGGG CCGAGGGCCG GGTGCGCGCC GAGCAGCAGC GCATGGCCTG CGACATCGAT
CTGAAGGGCC TGGTGGCGCT CACGGGCCTG CCGGAGCCGG AACTCCGCGC CCGCGCGGCG
GCGGCACCGG CGCCGCAGGC CCTGCCGGAT TCGCTGTTCG CCATCGATAC GCTGCCGGCC
CGCGTGCTGG CCCAGCGGCC CGACGTGTAT GCCGCCGAGC GCGAGGTGGC CGCGGCCAGT
GCCGACGTGG GCAACGCGCG CGCCCAGCGC TTTCCGCGCC TGACGCTCGC CGGTTCCGTC
GGCCGCGCCT GGGGCAGCAC GGGCGGCACG AGCGTGGCGA CGAACACCTG GTCGATCGGG
CCCGTCGGGG TGAGCCTGCC GATCTTCGAC GCGGGTCGCC GTGCCGCCCA GGTGGATGCG
GCAAAAGCCC GCTACCAGGA GGCCGCGCAG CTCTACCGCG CGAACGTGCG CCGTGCGGTG
AGCGAGGTCG AGCAGGCCCT GGTGCGGCTC GCGAGCACGG CCGCGCGCAG TGCCGATGCC
GAACGCGCCG CCGCGGGCTA CCGCGCCTCC TTCGTCGCGA CCGAAGCGCG CTGGCGCAGC
GGCCTCGCGA GCCTGCTGGA GCTGGAGGAA ACGCGCCGCA CCGCCCTCAA TTCCGAGACC
GCGCTCATCT CGCTGCGCCA GGAGCGCATG GCGGCATGGA TCGGCCTCTA CCGCGCCGCG
GGCGGCGGAT GGGAAGGACC CGCGCAGGCA TCCACACCCG TACCCGCCTC CGCCGCGCCC
TGA
 
Protein sequence
MMQTLSHGPR RLLGAAVLFA LAGCAATAPP PRVDAPAPAG WQAPLPHQGR VEDIARWWER 
LGDPLLTDLI AAAQDVSPDV AQARSRVEQA RATQMAARSA LLPGVDAQGN ASRGTSQQAA
GLATTVQGVV QASWEVDVFG GNAAAAEAAR QRLAGAQARW HEARVSVAAE VATQYDAWRQ
CLRLADVAQS DARSRSESAR LTEASERAGF TAPATLALAQ ASGAEGRVRA EQQRMACDID
LKGLVALTGL PEPELRARAA AAPAPQALPD SLFAIDTLPA RVLAQRPDVY AAEREVAAAS
ADVGNARAQR FPRLTLAGSV GRAWGSTGGT SVATNTWSIG PVGVSLPIFD AGRRAAQVDA
AKARYQEAAQ LYRANVRRAV SEVEQALVRL ASTAARSADA ERAAAGYRAS FVATEARWRS
GLASLLELEE TRRTALNSET ALISLRQERM AAWIGLYRAA GGGWEGPAQA STPVPASAAP