Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4662 |
Symbol | |
ID | 4669930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 5200719 |
End bp | 5202161 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 639825858 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_972971 |
Protein GI | 120613293 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCAGA CCCTCTCCCA CGGGCCCCGC CGCCTTCTCG GCGCGGCCGT CCTGTTCGCC CTGGCCGGCT GCGCGGCCAC CGCGCCGCCG CCGCGCGTCG ATGCCCCTGC GCCCGCCGGC TGGCAGGCCC CGCTGCCGCA CCAGGGCCGC GTGGAAGATA TCGCGCGCTG GTGGGAGCGC CTGGGCGATC CACTGCTCAC CGACCTGATC GCCGCCGCGC AGGACGTGTC TCCGGACGTC GCCCAGGCCC GCTCGCGCGT GGAACAGGCC CGGGCCACGC AGATGGCCGC ACGCTCGGCG CTGCTGCCGG GCGTGGATGC CCAGGGCAAC GCGAGCCGGG GCACCAGCCA GCAGGCTGCG GGGCTGGCGA CGACCGTGCA GGGCGTCGTG CAGGCCAGCT GGGAGGTGGA CGTCTTCGGC GGCAACGCCG CTGCCGCCGA GGCCGCGCGG CAGCGCCTGG CCGGCGCGCA GGCCCGGTGG CACGAGGCCC GCGTGTCGGT GGCCGCGGAA GTCGCCACGC AGTACGACGC ATGGCGGCAG TGCCTGCGGC TGGCGGACGT GGCGCAATCC GATGCCCGCT CGCGCTCCGA GAGCGCGCGC CTCACGGAAG CCAGCGAACG CGCGGGCTTC ACCGCGCCGG CCACGCTGGC GCTCGCCCAG GCCAGCGGGG CCGAGGGCCG GGTGCGCGCC GAGCAGCAGC GCATGGCCTG CGACATCGAT CTGAAGGGCC TGGTGGCGCT CACGGGCCTG CCGGAGCCGG AACTCCGCGC CCGCGCGGCG GCGGCACCGG CGCCGCAGGC CCTGCCGGAT TCGCTGTTCG CCATCGATAC GCTGCCGGCC CGCGTGCTGG CCCAGCGGCC CGACGTGTAT GCCGCCGAGC GCGAGGTGGC CGCGGCCAGT GCCGACGTGG GCAACGCGCG CGCCCAGCGC TTTCCGCGCC TGACGCTCGC CGGTTCCGTC GGCCGCGCCT GGGGCAGCAC GGGCGGCACG AGCGTGGCGA CGAACACCTG GTCGATCGGG CCCGTCGGGG TGAGCCTGCC GATCTTCGAC GCGGGTCGCC GTGCCGCCCA GGTGGATGCG GCAAAAGCCC GCTACCAGGA GGCCGCGCAG CTCTACCGCG CGAACGTGCG CCGTGCGGTG AGCGAGGTCG AGCAGGCCCT GGTGCGGCTC GCGAGCACGG CCGCGCGCAG TGCCGATGCC GAACGCGCCG CCGCGGGCTA CCGCGCCTCC TTCGTCGCGA CCGAAGCGCG CTGGCGCAGC GGCCTCGCGA GCCTGCTGGA GCTGGAGGAA ACGCGCCGCA CCGCCCTCAA TTCCGAGACC GCGCTCATCT CGCTGCGCCA GGAGCGCATG GCGGCATGGA TCGGCCTCTA CCGCGCCGCG GGCGGCGGAT GGGAAGGACC CGCGCAGGCA TCCACACCCG TACCCGCCTC CGCCGCGCCC TGA
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Protein sequence | MMQTLSHGPR RLLGAAVLFA LAGCAATAPP PRVDAPAPAG WQAPLPHQGR VEDIARWWER LGDPLLTDLI AAAQDVSPDV AQARSRVEQA RATQMAARSA LLPGVDAQGN ASRGTSQQAA GLATTVQGVV QASWEVDVFG GNAAAAEAAR QRLAGAQARW HEARVSVAAE VATQYDAWRQ CLRLADVAQS DARSRSESAR LTEASERAGF TAPATLALAQ ASGAEGRVRA EQQRMACDID LKGLVALTGL PEPELRARAA AAPAPQALPD SLFAIDTLPA RVLAQRPDVY AAEREVAAAS ADVGNARAQR FPRLTLAGSV GRAWGSTGGT SVATNTWSIG PVGVSLPIFD AGRRAAQVDA AKARYQEAAQ LYRANVRRAV SEVEQALVRL ASTAARSADA ERAAAGYRAS FVATEARWRS GLASLLELEE TRRTALNSET ALISLRQERM AAWIGLYRAA GGGWEGPAQA STPVPASAAP
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