Gene Aave_4652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4652 
Symbol 
ID4667538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp5182178 
End bp5182831 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content69% 
IMG OID639825848 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_972961 
Protein GI120613283 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACTT CCCGCACACT CATCGCCGCC ACCGCCGCCG TACTGCTCGC CAGTGGCTGC 
GCCAACATGA CCGATACCCA GCGTCGCACC GCCACCGGCG CGGGCGTGGG CGCCGCCGGC
GGTGCCGTCC TGGGAGCCGT GACGGGCGGC AATGCCGGCA CCGGCGCGCT GATCGGCGCC
GGGGTGGGTG CCCTGGGTAC CTACATCTGG TCCCAGCACA TGGAGCGCCA GAAGCAGGAA
ATGCAGCAGG TGACGCAGGG CACCGGCGTG GTGGTCACCC AGACGCAGGA CAACCAGCTC
AAGCTCGATA TTCCCAGCGA CATCTCGTTC GCGACCAATC GCTCAGACAT CCAGCCCAAC
TTCGCCCCGG TGCTGGACCG GTTCGCCGAA GGGCTGCGCA ACAATCCCAA TGCCGAGGTG
CGCATCGTCG GCTACACCGA TTCCACCGGC AACGATGCGA TCAACAACCC GCTGTCGCTC
GACCGGGCTA CCAGCACGCG CAACTATCTC ACTGCCCGCG GCGTGAACGG AGCGCGCGTC
CAGGTGGAAG GCCGGGGCGC ACGCGAGCCC GTGGCCACCA ACGATACGGC AGAAGGCCGC
GCGCGGAACC GCCGCGTGGA GATCTACGTG GGCGAGCGCC CGCGCCAGGG CTGA
 
Protein sequence
MRTSRTLIAA TAAVLLASGC ANMTDTQRRT ATGAGVGAAG GAVLGAVTGG NAGTGALIGA 
GVGALGTYIW SQHMERQKQE MQQVTQGTGV VVTQTQDNQL KLDIPSDISF ATNRSDIQPN
FAPVLDRFAE GLRNNPNAEV RIVGYTDSTG NDAINNPLSL DRATSTRNYL TARGVNGARV
QVEGRGAREP VATNDTAEGR ARNRRVEIYV GERPRQG