Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4652 |
Symbol | |
ID | 4667538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 5182178 |
End bp | 5182831 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639825848 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_972961 |
Protein GI | 120613283 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTACTT CCCGCACACT CATCGCCGCC ACCGCCGCCG TACTGCTCGC CAGTGGCTGC GCCAACATGA CCGATACCCA GCGTCGCACC GCCACCGGCG CGGGCGTGGG CGCCGCCGGC GGTGCCGTCC TGGGAGCCGT GACGGGCGGC AATGCCGGCA CCGGCGCGCT GATCGGCGCC GGGGTGGGTG CCCTGGGTAC CTACATCTGG TCCCAGCACA TGGAGCGCCA GAAGCAGGAA ATGCAGCAGG TGACGCAGGG CACCGGCGTG GTGGTCACCC AGACGCAGGA CAACCAGCTC AAGCTCGATA TTCCCAGCGA CATCTCGTTC GCGACCAATC GCTCAGACAT CCAGCCCAAC TTCGCCCCGG TGCTGGACCG GTTCGCCGAA GGGCTGCGCA ACAATCCCAA TGCCGAGGTG CGCATCGTCG GCTACACCGA TTCCACCGGC AACGATGCGA TCAACAACCC GCTGTCGCTC GACCGGGCTA CCAGCACGCG CAACTATCTC ACTGCCCGCG GCGTGAACGG AGCGCGCGTC CAGGTGGAAG GCCGGGGCGC ACGCGAGCCC GTGGCCACCA ACGATACGGC AGAAGGCCGC GCGCGGAACC GCCGCGTGGA GATCTACGTG GGCGAGCGCC CGCGCCAGGG CTGA
|
Protein sequence | MRTSRTLIAA TAAVLLASGC ANMTDTQRRT ATGAGVGAAG GAVLGAVTGG NAGTGALIGA GVGALGTYIW SQHMERQKQE MQQVTQGTGV VVTQTQDNQL KLDIPSDISF ATNRSDIQPN FAPVLDRFAE GLRNNPNAEV RIVGYTDSTG NDAINNPLSL DRATSTRNYL TARGVNGARV QVEGRGAREP VATNDTAEGR ARNRRVEIYV GERPRQG
|
| |