| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4602 |
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| Symbol | |
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| ID | 4666311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 5119812 |
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| End bp | 5122172 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639825800 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_972913 |
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| Protein GI | 120613235 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.930496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCTGG CCTGCCTGCC CCAATGGCTG TCCGCAGGCG ACCTTCCACC GCCGCCGTCC
GCCACGGGCG TGTCCACGGA GGCCGCCGCC CTCTACCTGG AGGTGGAAGT GAACGGCCGG
CCCGGGGAGG GTCTCGTCGC GGTCCGACAG CGCGGATCGC ATTTCGAGAT CGATGCGGCC
ACGCTGCGGC GCCTGCACGT GCAGACCGAC GAGCCCGACG GCACGCCCGT GGCCGTGGAC
ACCCTGCCGG GCGTTTCCGT GGCCTACGAC AGCCTCGCGC AGCGCCTGCG CATCGACGTG
CCGGCGCAGT GGCTGCCGAT GCAGCGGCTG GCCGGAGAGT CGCCGGAGGA TGTGGCCCTC
TCCCGGGGCA CCGGGCTGCT GATGAACTAC GAGTTCTACG CCACGCGGAC CCAGGGCCGC
ACGGCGGCCT CGCTGTGGTC GGAGCAGCGC TTTTTCGGCC TGCACGGAGT GGTTTCCCAC
ACGGGCGTGC TGCGCCGCGT GGACGGCGGC GCCAGCAACG GCTACCTGCG CTACGACACC
GCCTGGACGG ACACCGATGC CGGCAGCGCC ACGGCCTGGA CGGCCGGGGA CGTCATCACC
GGCGCGCTGC CCTGGACCAC GTCCGTGCGC CTGGGCGGGG TGCAATGGGC GCGCAATTTC
GCCGCGCGGC CCGACCTGGT GACGTATCCG ATGCCCGAGT TCGCCGGGCA GGCGGCCGTA
CCGTCGGCCG TGGACGTCTT CGTCAACGGC TTCCGCGCCG GCCGGCACAC CGTGCAGCCC
GGACCTTTCA CGCTGGGGGA GCTGCCGGCC GTGAATGGCG CCGGCATGGC GTCCGTGGTC
ACCACCGATG CGCTGGGCCG TCAGGTGGTG ACGTCCGTGC CGTTCTACGT CAGCAGCCAG
CTGCTGCGGC CGGGGTGGAC CGATTACTCG CTCTCGATCG GTGCGCTGCG GCGCGGCTAC
GGCGTGCGCA GCTTCGCCTA CGGCCGGCCG CTGGCCGCGG GCGTGCTGCG GCGGGGCGTG
ACCGATGCGA TCACGGTCGA GGCCCAGGCC CAGGCCGCCC GTGGCCTGGG CGTGCTGGGC
GCGGGCGGGC TCATGCGCTG GGGCACCCTG GGCGTGTTCA GCGCTTCGCT CACCTACGGC
CGCGCGGTAC CCGGCGACAC CGCGCTGCCG GACCGCAGCG GCGGCTGGCA GTGGAGCGCG
GGCTACCAGT ACAACACGCC GCGCGGCGGA ATCTCGCTGC TGGAAACGCG GCGCCTGCAC
GGCTTCGGTG ATGCCGCGGA CTACGGCGGC AGCCTGCAGC CATCCCGCCT CAGCCGGCAG
GTGAACGCGA GCCTGGTCGT CGGCTCCGCG TCGCTGGGCG CAGGATGGAT CGATCTGCGC
GGCGCGGGCG CGGAGCGCAG CCGGCTCGCC TATGCCAGCT ACAGCACGCC CCTCGGGCGC
GACGCCTTCT TTTCGCTGAC GGCGGGCCGC ACCGTCGAGA CCGGAGAAAC CCAGGTCCGC
GCCCAGTTGA CGTACCTGCT CGATCCGCTG CTGACGGCGC AGGCCGCCGC GGCGCACACC
GGCGGGCGGA CGCAGGGGGA AGCGGGGCTG CAGCGCAGCC TGCCGAGCAA CGGCGGCTTC
GGCTGGCGCA TCGCCCAGAC GCGCGGCGGC GGGCCCGCTG GCGGCGCGGG CGGCAACTAC
CGCCTCGCGA GCGCGCAATA CCAGGGCCGG CATGGCATGG TGCAGGGCGG GCTCTTCGGC
GCGGCCGCGG ACACCACGCA CTGGGCGGGT GCTTCGGGAT CGCTGGGCGC CATGGACGGC
TATGTGTTCG CCGCCAACCG CGTCACGGAC GGCTTCGCGC TCGTATCGAC GGACGGTGCG
CCCGGCGTGC CGATCACGTT CAACCACCAA TCCGTGGGAC GCACCGACAG CCAGGGCTAT
CTGCTGGTTC CCAACGTGCC CGCCTACTAT CCCGCGCGCT ACGCGATCGA CCCGCTGTCC
CTCCCGCCGG ACGTGCACAC GCCCGCTCTG GAACGGCGCA TAGCCGTGGC GCGGGGCACG
GGCACGCTGG TGCGCATGCC GGTGCTGCGC ATGCGCACGG CCACCCTGAC GCTGGTGGAC
GCGGCCGGCG AGCCGCTGCC TCCGGGCAGC GCCGTCGTGC ACGAGCAGGG CCAGGTACCC
ACGGTGGTGG GGTGGGACGG CGTGGTCTAC CTGACGGCGC TGCACACGCG CAACACGCTC
GCGGCCCGCA TGCCCGACGG GCGGGAATGC CGGGCCGCCT TCGATGCGGC GGAGCACGCG
GCGCAGCGCG ACCTGCGCGT GGTCTGCCGC GAGGGCGGGG CGCCGCGTTA TTCCGTCAGC
TCCGGGGGGG AGGCGCTGTG A
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| Protein sequence | MLLACLPQWL SAGDLPPPPS ATGVSTEAAA LYLEVEVNGR PGEGLVAVRQ RGSHFEIDAA
TLRRLHVQTD EPDGTPVAVD TLPGVSVAYD SLAQRLRIDV PAQWLPMQRL AGESPEDVAL
SRGTGLLMNY EFYATRTQGR TAASLWSEQR FFGLHGVVSH TGVLRRVDGG ASNGYLRYDT
AWTDTDAGSA TAWTAGDVIT GALPWTTSVR LGGVQWARNF AARPDLVTYP MPEFAGQAAV
PSAVDVFVNG FRAGRHTVQP GPFTLGELPA VNGAGMASVV TTDALGRQVV TSVPFYVSSQ
LLRPGWTDYS LSIGALRRGY GVRSFAYGRP LAAGVLRRGV TDAITVEAQA QAARGLGVLG
AGGLMRWGTL GVFSASLTYG RAVPGDTALP DRSGGWQWSA GYQYNTPRGG ISLLETRRLH
GFGDAADYGG SLQPSRLSRQ VNASLVVGSA SLGAGWIDLR GAGAERSRLA YASYSTPLGR
DAFFSLTAGR TVETGETQVR AQLTYLLDPL LTAQAAAAHT GGRTQGEAGL QRSLPSNGGF
GWRIAQTRGG GPAGGAGGNY RLASAQYQGR HGMVQGGLFG AAADTTHWAG ASGSLGAMDG
YVFAANRVTD GFALVSTDGA PGVPITFNHQ SVGRTDSQGY LLVPNVPAYY PARYAIDPLS
LPPDVHTPAL ERRIAVARGT GTLVRMPVLR MRTATLTLVD AAGEPLPPGS AVVHEQGQVP
TVVGWDGVVY LTALHTRNTL AARMPDGREC RAAFDAAEHA AQRDLRVVCR EGGAPRYSVS
SGGEAL
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