Gene Aave_4583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4583 
Symbol 
ID4666339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp5102013 
End bp5102804 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content74% 
IMG OID639825781 
Productnucleotidyl transferase 
Protein accessionYP_972894 
Protein GI120613216 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.693762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTC CACCGACGAC ATCTCCCGCT CCGCCCCTCT CCGCCACGGC CCCGCAGCCG 
CCGGCCATGC TGCTGGCCGC CGGCCGGGGC GAACGCATGC GCCCGCTGAC CGACGCCACC
CCGAAGCCGC TGCTGGCCGT GCGCGGTCGC CCGCTGCTGC AGTGGCACCT GGAGGCCCTG
ATCGCGGCCG GCGTGCGCTC GGCCGTGGTC AACACGGCCT GGCTGGGCGA GCAGATCGGC
GAGCGGTTCG GAGGCCGGTT CACCGCGGGC GACGGGACAG CGGGCGAGGC GTTGTCGATC
GCGTACTCGC ATGAAGGCCG CGACTTCGGT GCCGCGCTGG AGACGGCGGG TGGCATCGCC
CGCGCCCTGC CGCAGCTGGG GGACGTGTTC TGGCTGGCGG CGGGGGATGT GTTCGCACCC
GATTTCCGGT TCGCGGCGGA GGATGCGGCG GCTTTCAAAG CTGGCGAGGC GCTGGCCCAT
CTCTGGCTCG TGCCCAATCC GCCACACCAC CCGCGCGGCG ATTTCGGCCT CTCGCCGGAC
GGCCGCGCGC TCAACCTCCC GGCGGATCAT CCAGGGCCGC GTTACACCTA CAGCACGCTC
GCGCTGCTGC GGGCGGACCT CTTCGCCGAG CCCTGGTGCG ATATCCCCGC AGGCAATCCC
GGCGGCGCGG CCGCGCCGCT CGCACCGCTG CTGCGTCGTG CCATGGACCA GGGGCGCGTC
ACGGCGTCGC TCTACACCGG GCGGTGGACC GACGTGGGGA CGCCGGAGCG GCTGGCGGCG
TTGAATCGCT GA
 
Protein sequence
MTIPPTTSPA PPLSATAPQP PAMLLAAGRG ERMRPLTDAT PKPLLAVRGR PLLQWHLEAL 
IAAGVRSAVV NTAWLGEQIG ERFGGRFTAG DGTAGEALSI AYSHEGRDFG AALETAGGIA
RALPQLGDVF WLAAGDVFAP DFRFAAEDAA AFKAGEALAH LWLVPNPPHH PRGDFGLSPD
GRALNLPADH PGPRYTYSTL ALLRADLFAE PWCDIPAGNP GGAAAPLAPL LRRAMDQGRV
TASLYTGRWT DVGTPERLAA LNR