Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4541 |
Symbol | |
ID | 4668383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 5056076 |
End bp | 5057944 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639825739 |
Product | K+ potassium transporter |
Protein accession | YP_972852 |
Protein GI | 120613174 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3158] K+ transporter |
TIGRFAM ID | [TIGR00794] potassium uptake protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCAACGCT CCAAATCCTC GCTTGCGGCG CTCACACTCG GCGCCATCGG CGTCGTATAT GGCGACATCG GCACCAGCGT GCTGTATGCC GTCAAGGAAG TCTTCGGCTC CGGCCACGTG GCCTTCACGC CCCAGAACGT CTACGGCGTC CTCTCCATCC TTTTCTGGAC GCTCACCACC ATCGTCTCGC TGAAGTATGT CGTGCTCGTC CTGCGGGCGG ACAACAACGG CGAAGGCGGG CTCATCGCCA TGCTGGCACT GGCCTCCCAG GCCGTGAAGG ACAAACCGAG ACTGCGCTCC GCGCTGCTGG GCATCGGCGT CTTCGGAACC TCCCTGTTCT ACGGCGACGG GGTCATCACG CCCGCCATAT CCGTGCTCTC GGCGGTGGAA GGGCTCGAGG TCGTTTCGCC GCACTTCGGC AAAGCCGTCA TACCCCTGAC GCTCATCGTG CTGTTCTGCC TGTTTGCCGT GCAAAAGCGC GGCACCAGTG GCATCGGGCG CTACTTCGGC CCGGTCACGC TCGTGTGGTT CACCTCCATC GCCGCCCTGG GCGTGCCGCA CATCGTGGGC CATCCGGAAA TCCTGGGTGC CCTCAGCCCG CACCACGCCC TCGGCTTCAT CTGGCGCAGC CCGGGAACGA GCTTCATCAT CCTCGGCGCC GTGGTCCTCT GCGTGACCGG TGCCGAAGCC CTCTACGCCG ATCTCGGGCA CTTCGGAAAG AAGCCGATCC GCCTGGCATG GTTCAGCGTG GCCATGCCCG CCCTCACCAT CAACTACTTC GGGCAGGGCG CCCTGCTGCT CGCGGAGCCG GAAGCCGTCA AGAACCCTTT CTACATGATG GCTCCCGACT GGGCGCTCAT TCCGCTCGTG ATCATGGCCA CGATGGCCAC CGTCATCGCG TCCCAGGCCC TGATCACCGG AGCATTCAGC GTGACCAAGC AGGTCATCCA ACTGGGCTAC CTGCCACGGC TGAACATCCT GCACACCAGC GTGCGCGATA CCGGCCAGAT CTACATACCG TTCGTCAACT GGGCGCTGTT CCTCGCCATC GTCCTGGCCG TAGTCATGTT CCGTTCCAGC AGCAATCTCG CGGCCGCCTA TGGCATCGCC GTCACGCTGG ACATGCTCAT CACGACCGTG CTCACCTTCT TCGTCATCCG CTATGGCTGG CGGTATCCGC TGGCGCTGTG CATCGCGGCC ACGGGCTTCT TCTTCCTCGT GGATCTCGCC TTCTTCGGCT CCAACCTGCT CAAGCTGCTG CAGGGCGGCT GGTTCCCGCT GATGATCGGC TCCATCGTCT TCATGCTCAT GATGACCTGG AAGCGCGGCC GCGAGCTCCT GAACGAGAAG CTGCGCGCCG ATGCCATCGA CCTGAGGGAC TTCCTCACGG CGGTGTTCGT CAATCCCCCG ACCCGCGTGG ACGGCACGGC GGTCTTCCTG ACGGCGGAGC CGGGAGCGGT GCCGAACGCG CTGCTCCACA ACCTCAAGCA CAACAAGGTC CTGCACCAGC AGAACCTTTT CGTCACCGTA CGCAACCACG AAGTCCCCTG GATCGGCCTC GACAAACGCC TGCAGGTCGA GGCGCTCGGC GGCGACTGCT GGCAGGTCAT GGTGCACTAC GGCTTCAAGA ACGACCCTGA CCTCCCGGGC GCGCTGGCAC TCATGCGCGG GCGCGGGTGC GAACTGGAGT CGATGACCAC CAGCTACTTC CTCTCCCGGG ACGTGGTCAC CCCGACGATC GGCAGCGGCA TGGCACCCTG GCGGGAAAAG CTCTTCGCCC AGATGCACCA CAACGCGAGC GGCGCCGCAG GCTTTCTCAA CCTCCCCAGC AATTCCGTGG TGGAACTGGG CTCCAAGATC GAGATCTGA
|
Protein sequence | MQRSKSSLAA LTLGAIGVVY GDIGTSVLYA VKEVFGSGHV AFTPQNVYGV LSILFWTLTT IVSLKYVVLV LRADNNGEGG LIAMLALASQ AVKDKPRLRS ALLGIGVFGT SLFYGDGVIT PAISVLSAVE GLEVVSPHFG KAVIPLTLIV LFCLFAVQKR GTSGIGRYFG PVTLVWFTSI AALGVPHIVG HPEILGALSP HHALGFIWRS PGTSFIILGA VVLCVTGAEA LYADLGHFGK KPIRLAWFSV AMPALTINYF GQGALLLAEP EAVKNPFYMM APDWALIPLV IMATMATVIA SQALITGAFS VTKQVIQLGY LPRLNILHTS VRDTGQIYIP FVNWALFLAI VLAVVMFRSS SNLAAAYGIA VTLDMLITTV LTFFVIRYGW RYPLALCIAA TGFFFLVDLA FFGSNLLKLL QGGWFPLMIG SIVFMLMMTW KRGRELLNEK LRADAIDLRD FLTAVFVNPP TRVDGTAVFL TAEPGAVPNA LLHNLKHNKV LHQQNLFVTV RNHEVPWIGL DKRLQVEALG GDCWQVMVHY GFKNDPDLPG ALALMRGRGC ELESMTTSYF LSRDVVTPTI GSGMAPWREK LFAQMHHNAS GAAGFLNLPS NSVVELGSKI EI
|
| |