Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4528 |
Symbol | |
ID | 4667226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 5031881 |
End bp | 5033266 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639825717 |
Product | sun protein |
Protein accession | YP_972839 |
Protein GI | 120613161 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGCAT CCTCCCCGCA TCCTTCCCCT TCCCGCCCGG ATTCGCCCGG AGGGGCGATT CCCCTGTGGC GCCAGCTCGA CGCGGTGGTG GATGCCGTGA TGGCGGTGCG CGGCGGCCAG TCGGGTACCG CGGCCCTGGC GGCGGTGGAC CCGGTGCTGC GCGCGGGCGT TCAGGCGCTG TTCTTCGCGG TGCTGCGCCA GCTGGGCCGT GCGGAGGCGT TGCGGGCGCA ACTGGCCCCG CGGCGGCCCA AGCCGCGCGT GGATGCGCTG CTGTGCTCGA CCCTGGCCCT GGGTTGGCAA GCAGGTGCCG CTCCCTATGA GCCGTTCACG CTCGTGAACC AGGCGGTGGA GGCGGCCAAG CGCCATGCCG CCACGCGCGG GCAGGCAGCT TTCGTGAACG CCTGTCTGCG CCGCTTCCTC CGCGAGCGCG ATGCGCTGGT GGCCGCCACC GATTCGGATC CCGTCGCCCG GTGGAACCAT CCCGCGTGGT GGATCGAGCG CCTGCGGAAG GACCATCCCG GCCATTGGGA GCAGATCCTG CGGGCCAACA ACGCGCAGGC CCCGATGGCA TTGCGCATCC ACCGGGGCAA GGTGGACATG GCGGGCTACC TGGCCGCGCT GGAGGCTGTG GGAATGAAGG CCTGGCCGGC GACCGATACC GGTCTGGTCC TGGAGTCTCC GCAGCCCGTG CAGCGGCTTC CCGGGTTCGC CGACGGCCGG GTTTCGGTGC AGGATCTCGC GGCCCAGCAG GCCGCGCCCC TGCTGCTGTC AGGCCTGGAC CTGGGCCGGC CGCTGCGGGT GCTGGATGCC TGCGCGGCGC CGGGCGGCAA GACCGCCCAC CTGCTCGAGT ATGCCGGTGC CGGATCGCCG GTCCACGTGA CCGCGCTGGA GATCGACCCG CTGCGCAGCG CGCGCATCGG TGAAACGCTC CAGCGGCTGG GCCTGCGGGC GCAGGTGCTG GTGGCCGATG CCGGGCGCCC GGAGGACTGG TGGCAGCAGG CCTGCGGCGG AGAGCCCTTC GATGCCATCC TGCTGGACGC GCCCTGCACG GCGTCGGGCA TCGTGCGGCG CCATCCGGAT GTGCGCTGGC TGCGGCGCCC CGGGGACATC GCGCAGCTGG CCGCCCAGCA GGCGCGGCTG CTGTCCACGC TCTGGCCGCT GCTGCGGCCG GGCGGGCGCA TGCTGTATTG CACCTGTTCC GTGTTCCGCG CGGAAGGCGA TGACATGGTC CGGTCGTTTC TTGCGAACAA CAATGATGCC CATTTGCTGC CTTCTCCCGG ACATTTGCTG CCCCGGGATC CCGGTGATGG CGGCAGCGTC CGCGAGAATC CATCCCGTGA GCATGACGGT TTCTTCTACG CACTCCTGGG CCGGCAGCCC GCCTGA
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Protein sequence | MPASSPHPSP SRPDSPGGAI PLWRQLDAVV DAVMAVRGGQ SGTAALAAVD PVLRAGVQAL FFAVLRQLGR AEALRAQLAP RRPKPRVDAL LCSTLALGWQ AGAAPYEPFT LVNQAVEAAK RHAATRGQAA FVNACLRRFL RERDALVAAT DSDPVARWNH PAWWIERLRK DHPGHWEQIL RANNAQAPMA LRIHRGKVDM AGYLAALEAV GMKAWPATDT GLVLESPQPV QRLPGFADGR VSVQDLAAQQ AAPLLLSGLD LGRPLRVLDA CAAPGGKTAH LLEYAGAGSP VHVTALEIDP LRSARIGETL QRLGLRAQVL VADAGRPEDW WQQACGGEPF DAILLDAPCT ASGIVRRHPD VRWLRRPGDI AQLAAQQARL LSTLWPLLRP GGRMLYCTCS VFRAEGDDMV RSFLANNNDA HLLPSPGHLL PRDPGDGGSV RENPSREHDG FFYALLGRQP A
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