Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4511 |
Symbol | |
ID | 4669530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 5010693 |
End bp | 5011445 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639825699 |
Product | protein tyrosine/serine phosphatase |
Protein accession | YP_972822 |
Protein GI | 120613144 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2365] Protein tyrosine/serine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.271075 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.539759 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCTT TCTCGCGTTC ACTGCCCCTG GCGGGCGCCA CCAATTTCCG TGACCTGGGC GGCTATGCCG GGCAGGACGG GCGCACGGTC CGCTGGCGCC GCCTGTTCCG CTCCGACCAC CTGGCATGGC TCACCGCACA GGACGCCGAC ACGCTGGCGC CGCTGGGGCT GGTGCGCGCG ATCGACTTCC GCGGCGAGGC CGAGAGCGCC GCGCTGGCCT ACGCCCTGCC CGGCGTGGCC TACCACCCGC TGCCGATCGA GCCGACCGTG GTACAGCGCG CCAAGGACAT GGCGCTGGCC AACCGGCAGA TCACGCCCGC CATCGCCGTC GAGCTGATGC AGGACACGTA CCGCGCCTTC GTGTCCGACA ACGCGGCGCA GTTCGCCGCG CTGTTCGGGC ACCTGCTGCA GAGCGACGCG CCGCTGGTCT TCCACTGCAC CGCGGGCAAG GACCGGACGG GCTTCGCAGC GGCGCTGATC CTGCTCGCGC TCGGCGTGCC GCGCGACGTG GTGATGCAGG ACTACCTGCT GACCAACAGC CTCTACCAGC CGCCGGCGCA TTTCACCGGT ACCGCGCCGG CGGAGGTGAT GAATGTGCTC TGGCGCGTGC AGGAGGACTT CCTGCATGCC GCGCTGGACG CTGTGGACCA GGACCACGGC GGGCTGGACC GCTACCTGGC GGCGCGCCTG GGCGTCGGCC CGGCGGAGCG GGCGCGGCTG GCGCAGATGT ACCTGGACCC GGCGGGCGGT TGA
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Protein sequence | MASFSRSLPL AGATNFRDLG GYAGQDGRTV RWRRLFRSDH LAWLTAQDAD TLAPLGLVRA IDFRGEAESA ALAYALPGVA YHPLPIEPTV VQRAKDMALA NRQITPAIAV ELMQDTYRAF VSDNAAQFAA LFGHLLQSDA PLVFHCTAGK DRTGFAAALI LLALGVPRDV VMQDYLLTNS LYQPPAHFTG TAPAEVMNVL WRVQEDFLHA ALDAVDQDHG GLDRYLAARL GVGPAERARL AQMYLDPAGG
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