| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4437 |
|---|
| Symbol | |
|---|
| ID | 4666308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 4931981 |
|---|
| End bp | 4933177 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639825628 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_972751 |
|---|
| Protein GI | 120613073 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.806194 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCT GGACCCTGGC CCGACGCGCC GCGAAGATGA ACCCCTCGGT GATCCGCGAG
ATCCTGAAGG TGACCGAGAA GCCCGGCATC ATCAGCCTGG CGGGCGGCCT GCCCTCCCCC
AAGACCTTCC CGGTCGATGA CTTCGCGCAG GCCTGCGCGG CGGTGCTGGG CAACGACGGA
GCCTCCGCGC TGCAGTACGC CGCGAGCGAG GGCTACCTGC CGCTGCGCGA GGCCGTGGCG
GATTTCCTGC CCTGGGACGT GTCGCCCGAC CAGATCCTGA TCACCACCGG CTCGCAGCAG
GGCCTGGACC TGGTGGCCAA GGTGCTCATC GACGCGGGAA GCCGCGTGCT GGTGGAAACC
CCGACCTACC TCGGCGCCCT GCAGGCCTTC ACGCCCATGG AGCCCGACGT GCACAGCGTG
GCGAGCGACG ACGAAGGCCC GCTGGTGGAC GACCTGGCCG CCAAGGTGGG CACGGGCGCG
GACCGCGCGC GCTTCATGTA TCTGCTGCCC AACTTCCAGA ACCCCACGGG CCGCACGATG
ACCGAGGCGC GCCGCGCAGC GCTGTCGGCC AAAGCCGCCG AGCTGGGCCT GCCGCTGGTG
GAGGACAACC CCTACGGCGA CCTCTGGTTC GACCAGCCCC CGCCGCTGCC GCTCACCGCC
CGCAACCCGG AAGGCTGCAT CTACCTGGGC TCGTTCTCCA AGGTGCTGGC CCCCGGCCTG
CGCCTGGGCT TCCTGGTGGC CCCGCGCGCC CTCTACCCCA AGCTGCTGCA GGCCAAGCAG
GCGGCCGACC TGCACACCCC CGGATTCAAC CAGCGCATGG TGGCCGAGGT GATGAAGGGC
GGCTTCCTGG ACCGCCACGT GCCCACCATC CGCGCGCTCT ACAAGCAGCA GCGCGACGCG
ATGCTCTCGG CCATGGACCG CGAGATGCAG GGACTGGGCG TGACCTGGAA CCGCCCCGAC
GGCGGCATGT TCCTCTGGGC GCGCCTGCCG GAAGGCATGA GCGCGCTGGA CCTGCTGCCC
GAGGCCGTGG AGCGCAACGT GGCCTTCGTG CCCGGCGCGG CGTTCTATGC GGACAATGCC
GACGCGCGCA CGCTGCGCCT GTCCTTCGTC ACCGCGAGCG CGCAGCAGAT CCAGGACGGC
ATCGCCGCGC TGGCCGCCGC CATCCGCGCG CGCCTGCCCC AGTCCGTGGA GGCCTGA
|
|---|
| Protein sequence | MTTWTLARRA AKMNPSVIRE ILKVTEKPGI ISLAGGLPSP KTFPVDDFAQ ACAAVLGNDG
ASALQYAASE GYLPLREAVA DFLPWDVSPD QILITTGSQQ GLDLVAKVLI DAGSRVLVET
PTYLGALQAF TPMEPDVHSV ASDDEGPLVD DLAAKVGTGA DRARFMYLLP NFQNPTGRTM
TEARRAALSA KAAELGLPLV EDNPYGDLWF DQPPPLPLTA RNPEGCIYLG SFSKVLAPGL
RLGFLVAPRA LYPKLLQAKQ AADLHTPGFN QRMVAEVMKG GFLDRHVPTI RALYKQQRDA
MLSAMDREMQ GLGVTWNRPD GGMFLWARLP EGMSALDLLP EAVERNVAFV PGAAFYADNA
DARTLRLSFV TASAQQIQDG IAALAAAIRA RLPQSVEA
|
|---|
| |