Gene Aave_4425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4425 
Symbol 
ID4665476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4917756 
End bp4918538 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID639825616 
Productflagellar basal-body rod protein FlgG 
Protein accessionYP_972739 
Protein GI120613061 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAACT CGCTCTGGAT CGCCAAGACC GGCATGTCCG CCCAGCAAAC GCAGCTGGAC 
GTGATCTCCC ACAACCTCGC CAACGTCTCC ACCACCGGCT ACAAGCGCAA CAACGCGGTG
TTCGAGGACC TGATCTACCA GAACCTGCGC CAGGTGGGCG CGCAGACCAC CGAGCAGAAC
CAGTTGCCCA CCGGCCTGCA CCTGGGCCTG GGCGTGCGCA CGGTGGCCAC CAGCCGCAAC
TTCACGCAGG GCAGCCTGGC GCAGTCCAAC AACAACCTGG ACGTGGCCAT CAACGGCAAC
GGCTTCTTCC AGGTGACGAT GCCGGACGGC ACCACGGGTT ACACGCGCGA CGGCTCGTTC
CAGCTCGACT CGCAGGGGCG TCTGGTCACC TCCAGCGGCC TGCCGGTGGC CAATGGCATC
ACGGTGCCGG CCAACGCCAC GGGCATCAGC ATCAGCACGG ACGGCATCGT CTCGGCCACC
GTACCGGGCA CGACCGCGCC GCAGCAGATC GGCACCCTGG GCATGGCGAG CTTCATCAAC
TCGGCCGGCC TGGAGCCGAT CGGGCAGAAC CTGTTCAAGG AATCCGCCGC CTCGGGCCAG
CCCCAGCAGG GCACGCCCGG CACCAACGGC CTGGGCATCA TCCGCCAGGG CTTCCTGGAG
ACCTCCAACG TGAACGTGGT GGAAGAGCTG GTGTCCATGA TCCAGACACA GCGCGCCTAC
GAGATGAATT CCAAGGCCAT CCAGACATCC GACCAGATGC TGGCCAAGCT CGCGCAGCTG
TGA
 
Protein sequence
MINSLWIAKT GMSAQQTQLD VISHNLANVS TTGYKRNNAV FEDLIYQNLR QVGAQTTEQN 
QLPTGLHLGL GVRTVATSRN FTQGSLAQSN NNLDVAINGN GFFQVTMPDG TTGYTRDGSF
QLDSQGRLVT SSGLPVANGI TVPANATGIS ISTDGIVSAT VPGTTAPQQI GTLGMASFIN
SAGLEPIGQN LFKESAASGQ PQQGTPGTNG LGIIRQGFLE TSNVNVVEEL VSMIQTQRAY
EMNSKAIQTS DQMLAKLAQL