| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4416 |
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| Symbol | |
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| ID | 4665601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 4911213 |
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| End bp | 4911929 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639825607 |
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| Product | FliA/WhiG family RNA polymerase sigma factor |
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| Protein accession | YP_972730 |
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| Protein GI | 120613052 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.197457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACACCG CCAAAGGACA GCTCAACCGC GATGCATTGA TCCGCCAGCA CGCGCCGCTG
GTCCGCCGGA TCGCGCACCA CATGATCGCG AAGCTTCCGC CCAACGTGGA GCTGGACGAT
CTGATCCAGG TCGGCATGAT CGGGCTCAAC GAGGCGCTGT CGCGCTACGA GGTGACGCAG
GGCGTGCAGT TCGAGACTTT CGCCTCCCAG CGCATCCGCG GCGCCATGCT CGACGAGCTG
CGCGAGGGCG ACTGGATGTC GCGCAGTTCG CGCAAGAGCC AGAAGGAGAT CGAGCACGCC
GTGACCCGGC TGGAGCAGAA GCTCGGCCGC AGCCCGCACG AATCCGAGAT CGCCACGGAG
CTCGAACTCA GCCTGGCGGA ATACCAGTCC CTGCTGAGCA AGGTGCGCGG TACCCAGCTG
GTTTACCTCG AAGACATGAC GCGCGGCGAC GACGACGATG ACGGTTTCCT CGACCGCCAC
GTGGCCGACA GCGCGGCCGA TCCCATGGCC ATGCTGCGCG ACCAGCGCCT GCGCGCCTCC
CTGGTGGCGG CGATCAAGGC GCTGCCCGAA CGGGAGCAGC AGATCATGGG CATGTACTAC
GAGCACGACA TGAACCTGAA GGAGATCGCC GCGGTGCTGG GCGTGACCGA ATCGCGCATC
TGCCAGCTGC ACAGCCAGTC GATCGCCCGG CTGCGCGCGA AGATGCGCAG CCATTGA
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| Protein sequence | MYTAKGQLNR DALIRQHAPL VRRIAHHMIA KLPPNVELDD LIQVGMIGLN EALSRYEVTQ
GVQFETFASQ RIRGAMLDEL REGDWMSRSS RKSQKEIEHA VTRLEQKLGR SPHESEIATE
LELSLAEYQS LLSKVRGTQL VYLEDMTRGD DDDDGFLDRH VADSAADPMA MLRDQRLRAS
LVAAIKALPE REQQIMGMYY EHDMNLKEIA AVLGVTESRI CQLHSQSIAR LRAKMRSH
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