Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4413 |
Symbol | |
ID | 4665911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4906766 |
End bp | 4908847 |
Gene Length | 2082 bp |
Protein Length | 693 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639825604 |
Product | flagellar biosynthesis protein FlhA |
Protein accession | YP_972727 |
Protein GI | 120613049 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.402008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGACCC CCACGATCGC CTCCGCCCGC CAGTGGGCCG GCACTAATGT CTCCGCGCTG CAGGGCCTGT CGGCCCCGCT GCTGGTGGTG GCCATCCTGG CGCTGATGGT GCTGCCCATC CCTGCCTGGC TGCTGGACAC CTTCTTCACG CTCAACATCG CCGTGGCGCT GATGGTGATG ATGGTGGCGG CCTACATGCT GCGGCCTCTG GACTTCGCGG CATTCCCCTC CGTGCTGCTG CTCACCACCC TGATGCGGCT GTCGCTGAAC GTGGCCTCCA CCCGCGTGGT GCTGCTGGAG GGCCACACCG GCCCCGGCGC CGCCGGCGCG GTGATCGAGG CCTTCGGCCA CTTCCTGATC GGCGGGAACT TCGCGGTGGG CCTGATCGTG TTCGCCATCC TGGTGGTGAT CAACTTCGTG GTGGTGACCA AGGGCGCCGA GCGCATCGCC GAAGTTTCCG CACGCTTCAC GCTGGACGCC ATGCCCGGCA AGCAGATGGC GGTGGACGCC GACCTGAACG CCGGCCTGAT CGACGAGAAG GAGGCCAAGC GCCGCCGCGC CGAGGTGCAG GAGGAAGCGA ACTTCTTCGG CTCGATGGAC GGCGCCTCGA AGTTCGTGCG CGGCGATGCC GTCGCCGGCA TCCTGATCCT GCTCATCAAC ATCGTGGGCG GCTTCGCCAT CGGCATGCTG CAGCACGACC TGTCCGCAGG GCAGGCCGCC AACAGCTACA TCCTGCTGGC CGTCGGCGAC GCGCTGGTGG CGCAGATTCC CGGCCTGCTG ATCTCGGTGG CCGCCGCCAT GGTGGTCTCG CGCGTGGGCA AGGACCAGGA CATGGGCCGC CAGATCGTGC AGCAGCTCTT CATGTCGCCG CGCGTGCTGG GCGTGGCCGC CGCGATCCTG ATCATGCTCG GCCTGATTCC CGGCATGCCG CACGCCGTGT TCCTGGTGAT GGGCAGCGGC CTCGGCTATG CCGCCTGGCT GCTGCACCAG CGCGCGAACG CGCCCAAGCC GGTGGAAGCG CCGCCCGCCC CCGCGGGCGA CGGGGAGGCG AGCTGGGACG ACCTGCAGCC GGTGGACCTG CTGGGCCTGG AGCTGGGCTA CCGGCTGATC TCCCTGGTGG ACAAGAGCCG CCAGGGCGAC CTGCTGACCC GCATCAAGGG GGTGCGCCGC AAGTTCGCCC AGGAAGTAGG CTTCCTTCCC CCGGCGGTGC ACGTGCGCGA CAACCTCGAG CTCAAGCCCA GCGCCTATCG CATCACGCTG CGCGGCGTGG TGGTGGGCGA GGGCGAGGCG TTCCCGGGCA TGTTCCTGGC GATCAACCCC GGCGGCATCA GCACGCCGCT CATCGGCACG CCCACCACCG ACCCGGCATT CGGCCTGCCC GCCCACTGGA TCGACGACCA CCAGAAGGAA GCCGCACAAA TGGCGGGTTT TACGGTCGTT GATTCCGAAA CCGTGATGGC CACCCATTTG TCACACTTGA TGCAAGTCCA GGCCGCCAAG CTCCTGAGCC GCACCGAAAC GCAGCAGCTC GTGGAACACG TCGGCAAATT GGCCCCCAAG CTCATCGAGG AAGTGGTTCC GAAAATGGTG TCGATCGCAA CGTTCCAGAA GGTGCTCCAG CTGCTGCTGG AAGAGTCCGT GCACATCCGG GACATCCGCA CCATCATCGA AACCCTCGCC GAGCATGCGG GCGCCATCGG CGATCCGGTG GAGCTGGCGC GCCGCGTGCG CATCGCCCTC TCGCCGGCCA TCGTGCAGCA GATCTACGGC CCGACCCGCG AGCTCAACGT GATCGCGATC GAGCCGGGCC TGGAGCGCCT GCTGGTGCAG GCCCTGGGCA ACGCCGCCGG CCCCTCGCTC GACCCGGGCG TGGCCGACAT CCTCACGCAG AAGGCCGCGG AAGTGGCCAT GCGGCAGGAA GAGATGGGCA TGCCCGCCTG CCTGCTGGTG CCCGACGCCA TCCGCAACGC CGTCTCGCGC CTCGTGCGCC GGGTCGCCCC GCGCCTGCAG GTGCTCGCCC ACAGCGAGAT CCCTGAAACC CACACCATCC GCATTGGCCC GATCCTCAAA GGTGCAGCAT GA
|
Protein sequence | MKTPTIASAR QWAGTNVSAL QGLSAPLLVV AILALMVLPI PAWLLDTFFT LNIAVALMVM MVAAYMLRPL DFAAFPSVLL LTTLMRLSLN VASTRVVLLE GHTGPGAAGA VIEAFGHFLI GGNFAVGLIV FAILVVINFV VVTKGAERIA EVSARFTLDA MPGKQMAVDA DLNAGLIDEK EAKRRRAEVQ EEANFFGSMD GASKFVRGDA VAGILILLIN IVGGFAIGML QHDLSAGQAA NSYILLAVGD ALVAQIPGLL ISVAAAMVVS RVGKDQDMGR QIVQQLFMSP RVLGVAAAIL IMLGLIPGMP HAVFLVMGSG LGYAAWLLHQ RANAPKPVEA PPAPAGDGEA SWDDLQPVDL LGLELGYRLI SLVDKSRQGD LLTRIKGVRR KFAQEVGFLP PAVHVRDNLE LKPSAYRITL RGVVVGEGEA FPGMFLAINP GGISTPLIGT PTTDPAFGLP AHWIDDHQKE AAQMAGFTVV DSETVMATHL SHLMQVQAAK LLSRTETQQL VEHVGKLAPK LIEEVVPKMV SIATFQKVLQ LLLEESVHIR DIRTIIETLA EHAGAIGDPV ELARRVRIAL SPAIVQQIYG PTRELNVIAI EPGLERLLVQ ALGNAAGPSL DPGVADILTQ KAAEVAMRQE EMGMPACLLV PDAIRNAVSR LVRRVAPRLQ VLAHSEIPET HTIRIGPILK GAA
|
| |