Gene Aave_4382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4382 
Symbol 
ID4666596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4874913 
End bp4875542 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content66% 
IMG OID639825573 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_972696 
Protein GI120613018 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCACG TCGTGCTGTG CGACGACCAT GCCGTGCTGC GGCGCGGCAT CCGCGACACG 
CTCACCGAAG CGCCGGACAT CCAGGTGACC GGGGAGGCCG GCGGCTATTC GGAGCTGCGC
GAGATCCTGC GCAAGGCACC CTGCGATGTG CTGCTGCTGG ACCTGAACAT GCCGGGCCGC
AGCGGGCTGG AGGTGTTGAG CAGCCTGAAG GAAACGGATT CGGCCATCAA GGTACTCGTG
GTGTCGATGT ATCCCGAGGA CCAGTACGCC CTGCGCTGCC TCCGGGCGGG GGCGCAGGGC
TATGCCAACA AGGCCGGCGA TCCCATGGAG CTGATCGAGG CCGTCCGCAC CGTGATGAAG
GGCCGCAAGT ACCTGACGCC CGAGGTGGCG CAGATGCTCG CGGACAGCCT GGCGCAACCC
GCGCCCGAAC TTCCCCACGA GGCCCTGTCC GAGCGCGAAC TCCAGACGCT GGTGAAGATC
GCGTCCGGCA AGCGGCTTTC GGACATCGCG GAAGAGCTCA TGCTGAGTCC GAAGACCGTG
AGCGTGTACC GCTCGCGCGT GCTGGAGAAG CTCAAGCTCA GCAACAACGC CGAACTGACG
GTGTACGCCA TCCGCAACCA GCTGGTGTGA
 
Protein sequence
MIHVVLCDDH AVLRRGIRDT LTEAPDIQVT GEAGGYSELR EILRKAPCDV LLLDLNMPGR 
SGLEVLSSLK ETDSAIKVLV VSMYPEDQYA LRCLRAGAQG YANKAGDPME LIEAVRTVMK
GRKYLTPEVA QMLADSLAQP APELPHEALS ERELQTLVKI ASGKRLSDIA EELMLSPKTV
SVYRSRVLEK LKLSNNAELT VYAIRNQLV