Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4382 |
Symbol | |
ID | 4666596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4874913 |
End bp | 4875542 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639825573 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_972696 |
Protein GI | 120613018 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCACG TCGTGCTGTG CGACGACCAT GCCGTGCTGC GGCGCGGCAT CCGCGACACG CTCACCGAAG CGCCGGACAT CCAGGTGACC GGGGAGGCCG GCGGCTATTC GGAGCTGCGC GAGATCCTGC GCAAGGCACC CTGCGATGTG CTGCTGCTGG ACCTGAACAT GCCGGGCCGC AGCGGGCTGG AGGTGTTGAG CAGCCTGAAG GAAACGGATT CGGCCATCAA GGTACTCGTG GTGTCGATGT ATCCCGAGGA CCAGTACGCC CTGCGCTGCC TCCGGGCGGG GGCGCAGGGC TATGCCAACA AGGCCGGCGA TCCCATGGAG CTGATCGAGG CCGTCCGCAC CGTGATGAAG GGCCGCAAGT ACCTGACGCC CGAGGTGGCG CAGATGCTCG CGGACAGCCT GGCGCAACCC GCGCCCGAAC TTCCCCACGA GGCCCTGTCC GAGCGCGAAC TCCAGACGCT GGTGAAGATC GCGTCCGGCA AGCGGCTTTC GGACATCGCG GAAGAGCTCA TGCTGAGTCC GAAGACCGTG AGCGTGTACC GCTCGCGCGT GCTGGAGAAG CTCAAGCTCA GCAACAACGC CGAACTGACG GTGTACGCCA TCCGCAACCA GCTGGTGTGA
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Protein sequence | MIHVVLCDDH AVLRRGIRDT LTEAPDIQVT GEAGGYSELR EILRKAPCDV LLLDLNMPGR SGLEVLSSLK ETDSAIKVLV VSMYPEDQYA LRCLRAGAQG YANKAGDPME LIEAVRTVMK GRKYLTPEVA QMLADSLAQP APELPHEALS ERELQTLVKI ASGKRLSDIA EELMLSPKTV SVYRSRVLEK LKLSNNAELT VYAIRNQLV
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