| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4348 |
|---|
| Symbol | |
|---|
| ID | 4669252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 4830092 |
|---|
| End bp | 4830595 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639825534 |
|---|
| Product | YbaK/prolyl-tRNA synthetase associated region |
|---|
| Protein accession | YP_972662 |
|---|
| Protein GI | 120612984 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2606] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGTG CTGAACTTCA ATCCCTTCCC GAGGGCGTAC AGCGCGTGGC CGCCGCACTG
CAGGCCAAGG GCCATGCGCA GGGCCCTCGC ATGCTGGACA ACTCGGCGCG CACCGCGCAG
GAGGCCGCCG ATGCCCTGGG CATCGCCGTC GGCCAGATCG CCAAGAGCAT CATCTTCCGC
CGCAAGAGCG ACGACGCGGC GGTGCTGGTG GTCACCTCGG GCGACCGGCG GGTGGATGAG
AAGAAAGTGG AAGCGCACGT AGGCAAGGTG GGCCGCGCCG ACGCGGATTT CGTGAAGGCG
CGCACCGGCT TTTCGATCGG CGGCGTCTCG CCCGTGGCCC ATGCCACGCC GCCGGTCACG
CTGATCGACC GCGAGCTGTT CCGCTTCGAC GAGATCTGGG CGGCCGCGGG CCATCCGCAC
GGCGTGTTCC CGCTGCGTCC GCAGGATCTG GAGGCGCTGA CCGGTGCGCC GGTCGTGGAC
GTGGTCCAGC CGCCCGCCGC ATGA
|
|---|
| Protein sequence | MCGAELQSLP EGVQRVAAAL QAKGHAQGPR MLDNSARTAQ EAADALGIAV GQIAKSIIFR
RKSDDAAVLV VTSGDRRVDE KKVEAHVGKV GRADADFVKA RTGFSIGGVS PVAHATPPVT
LIDRELFRFD EIWAAAGHPH GVFPLRPQDL EALTGAPVVD VVQPPAA
|
|---|
| |