| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4345 |
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| Symbol | |
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| ID | 4668623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4827331 |
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| End bp | 4828989 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639825531 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_972659 |
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| Protein GI | 120612981 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACCA ATGTCGCTCC CCGGCCGATG TCGCCGGAAG AAAGAAAAGT CATCCTGGCC
TCGTCGCTGG GTACCGTTTT CGAGTGGTAC GACTTCTACC TGTACGGTTC GCTCGCCGCC
ATCATCGCCA AGCAGTTCTT CAGCGGACTG GATGCGGGCT CCGCCTTCAT CTTCGCGCTG
CTGGCCTTCG CCGCCGGGTT CATCGTGCGG CCGTTCGGCG CGCTGGTGTT CGGGCGGCTG
GGCGACATGA TCGGGCGCAA GTACACCTTC CTGGTCACCA TCCTGATCAT GGGCCTGTCC
ACCTTCATCG TGGGGGTCCT GCCGACCTAT GCCAGCATCG GCGTGGCCGC CCCGGTCATC
CTGATCGTGC TGCGCATGCT GCAGGGCCTG GCCCTGGGCG GCGAGTACGG CGGTGCCGCC
ACCTACGTGG CCGAGCACGC GCCGCAGGGC AAGCGCGGCG CCTACACCTC CTGGATCCAG
ACCACCGCCA CGATGGGCCT GTTCCTGTCG CTGCTGGTCA TCCTGGGCAC CCGCACCGTG
ATGGGCGAGG AAGCCTTCAC CGACTGGGGC TGGCGCATCC CGTTCCTCGT CTCCATCCTG
CTGCTGGGCA TCTCGCTGTG GATCCGGCTG TCGCTGTCGG AATCGCCCGC CTTCCAGCGG
ATGAAGGCCG AGGGCAAGAC CTCCAAGGCG CCTCTGCGCG AATCGTTCGG CCAATGGAAG
AACCTGAAGA TCGTGATCCT GGCGCTGATC GGCCTGACCG CCGGCCAGGC CGTGGTCTGG
TACACGGGCC AGTTCTACGC GCTCTTCTTC CTGACGCAGC AGCTCAAGGT GGATGCCGTC
ACCGCCAACC TGATGATCGC CGCCGCCCTG CTGATCGGCA CGCCGTTCTT CGTCGTCTTC
GGCGCGCTTT CCGACCGTAT CGGCCGCAAG CCCATCATCA TGCTGGGCTG CGTGCTGGCC
GTGCTGACGT ATTTCCCCGT CTTCAAGGCG CTGACCGAAG CCGCCAACCC CGACCTGGCC
GCCGCGCAGG CGAAGAACAA GGTGGTGATC GTGGCCGACC CGGCCGAGTG TTCGTTCCAG
TTCAACCCGA CCGGCACGGC CAAGTTCACC AGCTCCTGCG ACGTCGCCAA GCAGGTGCTG
GCCGCCAGCT CGGTGAGCTA CGACAACGAG GCCGCGCCGG CCGGCACGCC CGCGGTGATC
AAGATCGGCC AGACCACCAT TCCGAGCTAC TCCGCCCGCG GCCTGCCCGC CGACGAGGCG
AAGGCCAAGG ATGCCGCCTT CAAGAAGGCC GTGGCCGAGA CGCTCAAGGC CGACGGCTAT
CCCTCCAAGG CCGACCCCGC CAAGATGAAC AAGGTGATGA TGATCGTCAT CCTGACGTAC
CTGGTGCTGC TGGTGACCAT GGTGTACGGC CCCATCGCGG CGATGCTGGT GGAGATGTTC
CCCACCCGCA TCCGCTACAC CTCGATGAGC CTGCCCTACC ACATCGGCAA CGGCTGGTTC
GGCGGCCTGC TGCCCACCAT GTCGTTCGCG ATCGTGGCGC AGACCGGCAA CATGTACAAC
GGCCTCTGGT ATCCGATCAT CATCGCGGGC GTGACGGCCG TGATCGGCAC GCTGTTCATC
CGCGAGACCA AGGACGTGGA CATCTACGCC AACGACTGA
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| Protein sequence | MATNVAPRPM SPEERKVILA SSLGTVFEWY DFYLYGSLAA IIAKQFFSGL DAGSAFIFAL
LAFAAGFIVR PFGALVFGRL GDMIGRKYTF LVTILIMGLS TFIVGVLPTY ASIGVAAPVI
LIVLRMLQGL ALGGEYGGAA TYVAEHAPQG KRGAYTSWIQ TTATMGLFLS LLVILGTRTV
MGEEAFTDWG WRIPFLVSIL LLGISLWIRL SLSESPAFQR MKAEGKTSKA PLRESFGQWK
NLKIVILALI GLTAGQAVVW YTGQFYALFF LTQQLKVDAV TANLMIAAAL LIGTPFFVVF
GALSDRIGRK PIIMLGCVLA VLTYFPVFKA LTEAANPDLA AAQAKNKVVI VADPAECSFQ
FNPTGTAKFT SSCDVAKQVL AASSVSYDNE AAPAGTPAVI KIGQTTIPSY SARGLPADEA
KAKDAAFKKA VAETLKADGY PSKADPAKMN KVMMIVILTY LVLLVTMVYG PIAAMLVEMF
PTRIRYTSMS LPYHIGNGWF GGLLPTMSFA IVAQTGNMYN GLWYPIIIAG VTAVIGTLFI
RETKDVDIYA ND
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