Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4344 |
Symbol | |
ID | 4669621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 4826134 |
End bp | 4827156 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639825530 |
Product | porin |
Protein accession | YP_972658 |
Protein GI | 120612980 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACCC AGCGTCTCGT TTCTTTCGCC GCCCTCGCTC TTCTCGGCAG TTCCGCCACC TTCGCGCAAA GCAGCGTGAC GCTGTATGGC CGAGTCAACA CCAGCATCGA ACGCACCAGC CTGCTCGGCC AACACTGGAC CGGCGTGAAC GACAACGCGT CCCGCTTCGG ACTCAAGGGA GTGGAGGATC TGGGCGGCGG TTTGAAAGCC GGATTCCAGC TCGAAAGCGG TTTCGACAGT TCCACCGGCG AGGCCGCACA AACCTTCTTC GGCCGCCAGA GCGAGGTGAA TCTGTCGGGG AGTTTCGGCA AGATCCGCCT GGGCAACTGG ATTCCCGAGT CGTATTACGC CGTGGCGGAC TACGGCGTGC AGGACCAGCC CAACCACGAC ACCGGTAGTT TCTCCAACCG GCTGTACCAG TCGGTCGCCT TCGGCCATGC CAACAAGATC GGCTACCGCA CGCCCGAATT CGGCGGCTTC TGGGCCGAGG CCAGCGTGAG CGCCCATGAG AAGGTGGCAC AGATCGCTCC CTCCGGCCTG CCTGCGGGCA GCAAGTACGT CTACGACCTG GCCGCCAACT GGGAGCGCGG TCCGCTGGCG TTCGGCGCCG GTTATGCCAA GCTGGGCGAC AACTGGGATG CGGGCCTGCG CGGCCATTAC ACCGTGGGCG CCATCCAGGT GGCGGGCTAT TACCAGCGCA ACGATTACGA GGTTCTGGGG ACGCGCAACT CGGCAGGCCT GGCGGCCCAG TACGCCTTCG GTGCATCCGA GGTGGTGGCC AACTACATCT GGGCCGGCAA ATGGAGCAAT GTGGCGGACT CCAGCGCGCA GCAATTGATC CTCGGTTACA ACTACCACCT GAGCAAGCGC ACCAAGGTGT ATGCGGCCTA CACCCTCATC AAGAACAAGT CGGGAGCCAC TTACGGCTAT CGCGCCGGTC GTTTGAGCGC CGTCGAAGGC TTCACTCCGA TTCTTGGTGG AGATCCGCGC AGCGTCGGAG TGGGCGTGCG CCACAACTTC TGA
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Protein sequence | MQTQRLVSFA ALALLGSSAT FAQSSVTLYG RVNTSIERTS LLGQHWTGVN DNASRFGLKG VEDLGGGLKA GFQLESGFDS STGEAAQTFF GRQSEVNLSG SFGKIRLGNW IPESYYAVAD YGVQDQPNHD TGSFSNRLYQ SVAFGHANKI GYRTPEFGGF WAEASVSAHE KVAQIAPSGL PAGSKYVYDL AANWERGPLA FGAGYAKLGD NWDAGLRGHY TVGAIQVAGY YQRNDYEVLG TRNSAGLAAQ YAFGASEVVA NYIWAGKWSN VADSSAQQLI LGYNYHLSKR TKVYAAYTLI KNKSGATYGY RAGRLSAVEG FTPILGGDPR SVGVGVRHNF
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